RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Vmn2r20L7N2B1 853 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 OstnP61364 130 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Tekt4Q149S1 447 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 StradaQ3UUJ4 431 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Wnt8aQ64527 354 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Klhl23Q6GQU2 558 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Sec24dQ6NXL1 1032 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Efr3aQ8BG67 819 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Kyat1Q8BTY1 424 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Rbm4Q8C7Q4 361 aaKnown RBP11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 CcsapQ8QZT2 252 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Rbm4bQ8VE92 357 aaKnown RBP11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Olfr691Q8VGW5 322 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Olfr575Q8VH16 318 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Adad2Q9D5P4 478 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 TrilQ9DBY4 809 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Rab13Q9DD03 202 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Nmnat1Q9EPA7 285 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Pkp3Q9QY23 797 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Olfr1006A2ALD2 312 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Olfr1215A3KGY3 312 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Neurod4O09105 330 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 GzmcP08882 248 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Ptpn22P29352 802 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Cd9P40240 226 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Cry1P97784 606 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Emx2Q04744 253 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Cyp2c65Q148B1 490 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Sdf4Q61112 361 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Foxj1Q61660 421 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Cpsf6Q6NVF9 551 aaKnown RBP11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 ChdhQ8BJ64 596 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Zbtb33Q8BN78 671 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Q8BWQ6 963 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Adnp2Q8CHC8 1165 aaKnown RBP11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Eif3lQ8QZY1 564 aaKnown RBP11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Tmem203Q8R235 136 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Ccdc92Q8VDN4 314 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Olfr371Q8VGB8 312 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Duoxa2Q9D311 320 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Ubqln5Q9D4I8 510 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Upk3bl1Q9D701 249 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Rhobtb1Q9DAK3 695 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 HgfacQ9R098 653 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Htra1Q9R118 480 aa11.34□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Apol11bE9PUZ0 337 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Acbd4E9Q289 327 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Zfp758E9QAA1 583 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Lhx8O35652 367 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gtf2h4O70422 463 aaKnown RBP11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 P01810 119 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tuba3aP05214 450 aaKnown RBP11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gna12P27600 379 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 GlrbP48168 496 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tm9sf2P58021 662 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Smpdl3aP70158 445 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cpne7Q0VE82 557 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Hhla1Q3TYV2 514 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tmem247Q497K7 211 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Fam71bQ5STT6 665 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Mxd4Q60948 209 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Pou4f2Q63934 411 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 HjurpQ6PG16 667 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ppp2r2bQ6ZWR4 443 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Rbm11Q80YT9 238 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Prdx6bQ8BG37 224 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Insig1Q8BGI3 259 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Sephs1Q8BH69 392 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cyp20a1Q8BKE6 462 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Fastkd3Q8BSN9 661 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Olfr985Q8VGB4 311 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 EbplQ9D0P0 206 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 TesclQ9DAJ7 231 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cmtm7Q9ESD6 167 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Epm2aQ9WUA5 330 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Myo16Q5DU14 1919 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Otud3B1AZ99 396 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gm6811E9Q3Y8 510 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gm9857F7CXR1 130 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gm6337K7N6X9 211 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gm3115L7N285 211 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 MaffO54791 156 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Grk4O70291 574 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Stx7O70439 261 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Hmga1P17095 107 aaKnown RBP11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Isl1P61372 349 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Pou1f1Q00286 291 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Foxk2Q3UCQ1 651 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Parp8Q3UD82 852 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 CrxosQ3UL53 246 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cox8aQ64445 69 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Syt14Q7TN84 555 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Olfr1036Q7TR85 310 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Prap1Q80XD8 149 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cyth4Q80YW0 393 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Susd6Q8BGE4 302 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 HadhaQ8BMS1 763 aaKnown RBP11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Fndc3aQ8BX90 1198 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gykl1Q8C635 549 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Fam126bQ8C729 530 aa11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms