RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Pcdhb8Q91XZ2 779 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Adgre4Q91ZE5 689 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pcyt2Q922E4 404 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Sohlh2Q9D489 467 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 FancgQ9EQR6 623 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Epb41l1Q9Z2H5 879 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Speer3W4VSP1 261 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 NuggcD3YWJ0 796 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Srp54bE9PXC0 504 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 RfngO09009 332 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gabrg2P22723 474 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Fpr1P33766 364 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rab21P35282 222 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rps17P63276 135 aaKnown RBP8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Slc45a4Q0P5V9 785 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Grid2ipQ0QWG9 1203 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 A630001G21RikQ3UTB2 229 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Sh3gl3Q62421 347 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cpsf6Q6NVF9 551 aaKnown RBP8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Magee1Q6PCZ4 918 aaKnown RBP8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ppp2r1bQ7TNP2 601 aaKnown RBP8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 AftphQ80WT5 931 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ston2Q8BZ60 895 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 CcinQ8CDE2 588 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Irak3Q8K4B2 609 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cdc16Q8R349 620 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Chrna3Q8R4G9 499 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Hdac8Q8VH37 377 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Moxd1Q9CXI3 613 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Fam174aQ9D3L0 190 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 4930513O06RikQ9D549 161 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olig2Q9EQW6 323 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Brca2P97929 3329 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm3147A0A0J9YU88 481 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm10424A0A0J9YVD0 481 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm21731A0A286YDE9 180 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Mtx3D3YTP3 312 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm20721E9Q2U8 318 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 FpgtG5E8F4 590 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Vmn2r75G5E8Z7 853 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm29394H3BIW7 199 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Spdye4cI6XKQ3 339 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm7971J3QMM8 481 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 H2-Q7P14429 334 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 H2-Q9P14431 200 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Emp1P47801 160 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Hsf5Q5ND04 624 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cdkn2cQ60772 168 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 XiapQ60989 496 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Fgfr3Q61851 801 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zzz3Q6KAQ7 910 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 RragdQ7TT45 449 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zbtb42Q811H0 420 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 PstkQ8BP74 359 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Q8BWQ6 963 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 OsgepQ8BWU5 335 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 SuoxQ8R086 546 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Kdelr3Q8R1L4 214 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Vmn1r22Q8R2D1 302 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cys1Q8R4T1 145 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr808Q8VGI8 312 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Fam69bQ99ML4 431 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Asf1aQ9CQE6 204 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Acer3Q9D099 267 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Syvn1Q9DBY1 612 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Chrnb2Q9ERK7 501 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm5751A2AHC8 147 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Apol8A2VDH7 339 aaKnown RBP8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zfp946F6VWU8 523 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zfp809G3X9G7 402 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 P04213 122 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Calb2Q08331 271 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 StimateQ3UF25 288 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Itpripl2Q3UV16 535 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rnf43Q5NCP0 784 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Mocs1Q5RKZ7 636 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cep78Q6IRU7 790 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Smg5Q6ZPY2 1017 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 PimregQ8BFY7 231 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cdkal1Q91WE6 578 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Uqcc2Q9CQY6 136 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Dnaaf1Q9D2H9 634 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 1700086D15RikQ9D9E9 151 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Serpinb9bQ9DAV6 377 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Il22Q9JJY9 179 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 TrehQ9JLT2 576 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Actl7bQ9QY83 418 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rnf11Q9QYK7 154 aa8.5□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ssxb8B1AY40 170 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Bnc1O35914 961 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Dsg2O55111 1122 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Akap3O88987 864 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cyp1a1P00184 524 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 EnpepP16406 945 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Bmp7P23359 430 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Mkl2P59759 1080 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tbx4P70325 552 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Smad4P97471 551 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 KizQ3UXL4 695 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 OmpQ64288 163 aa8.49□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms