RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Pitx1P70314 315 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Pabpc2Q62029 628 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Rps27lQ6ZWY3 84 aaKnown RBP11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Wwp1Q8BZZ3 918 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Map2k7Q8CE90 535 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ablim1Q8K4G5 861 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Pcdhb3Q91XZ7 784 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Camk1Q91YS8 374 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tomm70Q9CZW5 611 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tmem81Q9D5K1 259 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Zswim2Q9D9X6 631 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Clk3O35492 638 aa11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Sox6P40645 827 aa11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Rps14P62264 151 aaKnown RBP11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ranbp9P69566 653 aa11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Rpl10lP86048 214 aaKnown RBP11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Sim1Q61045 765 aa11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Runx3Q64131 409 aa11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Rpl10Q6ZWV3 214 aaKnown RBP11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Hfe2Q7TQ32 420 aa11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Samd4aQ8CBY1 711 aaKnown RBP11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Olfr866Q8VFI7 312 aa11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Slc3a1Q91WV7 685 aa11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Pcdhgb2Q91XX7 928 aa11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Hcar2Q9EP66 360 aa11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Hspb3Q9QZ57 154 aa11.65□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Tex13aA2AFS9 377 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Tgm7A2ART8 616 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Tcte1A6H639 498 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 5730507C01RikJ3QPX0 416 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Mtnd3P03899 115 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Aup1P70295 410 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Hddc2Q3SXD3 199 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Mthfd1lQ3V3R1 977 aaKnown RBP11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Six4Q61321 775 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Bcap31Q61335 245 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 SynpoQ8CC35 929 aaKnown RBP11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Aqp12Q8CHJ2 290 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Saysd1Q8K190 188 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Kdelr3Q8R1L4 214 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Scgb2b17S4R2V3 82 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cyp4a32A2A8T1 509 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 AdprhP54923 362 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cxcr5Q04683 374 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Eif1adQ3THJ3 170 aaKnown RBP11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Zmiz2Q8CIE2 920 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Chchd3Q9CRB9 227 aaKnown RBP11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Mrto4Q9D0I8 239 aaKnown RBP11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Borcs5Q9D920 195 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Atp6v1c1Q9Z1G3 382 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Icam1P13597 537 aaKnown RBP11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cdc42P60766 191 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Nfatc2Q60591 927 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Bbs4Q8C1Z7 520 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Smim14Q91VT8 99 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Elmod3Q91YP6 381 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Nrif2Q921B4 824 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 HnrnpllQ921F4 591 aaKnown RBP11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cnot11Q9CWN7 505 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Phf10Q9D8M7 497 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Gfra4Q9JJT2 260 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Spint1Q9R097 507 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 C7D3YXF5 845 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cyp2w1E9Q816 493 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Rem1O35929 297 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Tacr2P30549 384 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Rab21P35282 222 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ruvbl1P60122 456 aaKnown RBP11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 HltfQ6PCN7 1003 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Tmem198Q8BG75 360 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Dnm1lQ8K1M6 742 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Plcl2Q8K394 1128 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Chil4Q91Z98 402 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Mbd4Q9Z2D7 554 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Map2k3O09110 347 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Pdlim1O70400 327 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ccr3P51678 359 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Rnf44Q3UHJ8 407 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Psg28Q4KL66 472 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 NkaplQ5SZT7 395 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Btnl1Q7TST0 509 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Clrn1Q8K445 232 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Treml1Q8K558 317 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Adgrg3Q8R0T6 542 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Tsen15Q8R3W5 168 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Fam69bQ99ML4 431 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Fam227aQ9D3V8 625 aa11.64□□□□□ -0.55
Pcif1-201ENSMUST00000041643 AU018091E9PWS4 684 aa11.63□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cyp1a1P00184 524 aa11.63□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Gria1P23818 907 aa11.63□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ptchd3Q0EEE2 906 aa11.63□□□□□ -0.55
Pcif1-201ENSMUST00000041643 PtprrQ62132 656 aa11.63□□□□□ -0.55
Pcif1-201ENSMUST00000041643 C1qtnf6Q6IR41 264 aa11.63□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Tmc6Q7TN60 810 aa11.63□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Doc2aQ7TNF0 405 aa11.63□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Q810N5 247 aa11.63□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Timd2Q8R183 305 aa11.63□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Idh3bQ91VA7 384 aa11.63□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Bpifa3Q9D9J8 232 aa11.63□□□□□ -0.55
Pcif1-201ENSMUST00000041643 SrpraQ9DBG7 636 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms