RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Cdc25bP30306 576 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Atp6v1e1P50518 226 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Hrh2P97292 397 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Serac1Q3U213 654 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 StimateQ3UF25 288 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 PkdccQ5RJI4 492 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Zhx3Q8C0Q2 951 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Zbtb20Q8K0L9 741 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Swi5Q8K3D3 89 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Vmn1r6Q8R2D4 303 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Slc13a3Q91Y63 600 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gemin6Q9CX53 166 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Dsn1Q9CYC5 348 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 St6galnac4Q9R2B6 360 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Vmn1r49Q9WUF1 310 aa11.12□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm4756A0A140LIS8 335 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Olfr1040A2ARY1 313 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gjd2O54851 321 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 MycP01108 439 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 TecP24604 630 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Vps37aQ8CHS8 397 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Snx4Q91YJ2 450 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Mthfd1Q922D8 935 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Zfp84Q9D654 559 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gbe1Q9D6Y9 702 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tmem8aQ9ESN3 769 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Timp4Q9JHB3 224 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 VapaQ9WV55 249 aaKnown RBP11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ism1A2ATD1 454 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Zyg11aA2BFL2 627 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Znf518bB2RRE4 1077 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gosr2O35166 212 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 HunkO88866 714 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Fbln2P37889 1221 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 FhP97807 507 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Upf3aQ3ULJ3 422 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 SctrQ5FWI2 447 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Brsk1Q5RJI5 778 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Txndc15Q6P6J9 344 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Dnajc16Q80TN4 772 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Commd7Q8BG94 200 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 B3gnt5Q8BGY6 376 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 MaobQ8BW75 520 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Q8CDN1 933 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Socs4Q91ZA6 436 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 DarsQ922B2 501 aaKnown RBP11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cers2Q924Z4 380 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ndufaf7Q9CWG8 436 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Dnajb4Q9D832 337 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 EefsecQ9JHW4 583 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Orc6Q9WUJ8 262 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Smarcb1Q9Z0H3 385 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 S1pr4Q9Z0L1 386 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Il20rbE9Q9A6 308 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 SqleP52019 572 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Lad1P57016 528 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Muc1Q02496 630 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Mocs1Q5RKZ7 636 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Plekha8Q80W71 519 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Glt28d2Q8BML3 165 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Trnt1Q8K1J6 434 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Mcfd2Q8K5B2 145 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Adgrf1Q8VEC3 908 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gorasp1Q91X51 446 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 NarfQ9CYQ7 462 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rnf146Q9CZW6 359 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Zdhhc21Q9D270 265 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Duoxa2Q9D311 320 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rpl4Q9D8E6 419 aaKnown RBP11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Atg7Q9D906 698 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm8369E9PZI3 166 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ptger3P30557 365 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cyp2c65Q148B1 490 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Brms1lQ3U1T3 323 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ccdc177Q3UHB8 706 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Zc3hav1Q3UPF5 946 aaKnown RBP11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Klhl5Q6PFE1 708 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ugt2b35Q8BJL9 529 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Il31raQ8K5B1 716 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Vmn1r198Q8R263 300 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ranbp3Q9CT10 491 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Acbd7Q9D258 88 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 HephQ9Z0Z4 1157 aa11.11□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Marf1Q8BJ34 1730 aaKnown RBP11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Prdx3P20108 257 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Hsd17b4P51660 735 aaKnown RBP11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rap2aQ80ZJ1 183 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Appl1Q8K3H0 707 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gprc6aQ8K4Z6 928 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Oit3Q8R4V5 546 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tmem161aQ8VCA6 480 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rwdd2bQ99M03 290 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Dhrs7Q9CXR1 338 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Eif4e3Q9DBB5 207 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Osbpl3Q9DBS9 855 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rbbp6P97868 1790 aaKnown RBP11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Olfr1375A0A0N4SUP0 313 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Mup6A2AV72 179 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Nsmce4aG3XA30 381 aa11.1□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Aif1O70200 147 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms