RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 CDYLQ9Y232 598 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 PCDHB3Q9Y5E6 796 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 SPTA1P02549 2419 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 B8ZZF3 427 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 TMEM150CB9EJG8 249 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 GOLGA8KD6RF30 607 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 GOLGA8TH3BQL2 631 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 TERTO14746 1132 aaKnown RBP16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 TMEM63AO94886 807 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 CHRM5P08912 532 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 UGT2B7P16662 529 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 ARNTP27540 789 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 EIF3BP55884 814 aaKnown RBP16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 POLE2P56282 527 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 ABRQ12979 859 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 CYP1B1Q16678 543 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 DEFB109BQ30KR1 87 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 MRNIPQ6NTE8 343 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 SDCCAG8Q86SQ7 713 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 TRIM73Q86UV7 250 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 LRRC6Q86X45 466 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 CFAP61Q8NHU2 1237 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 GSDMBQ8TAX9 411 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 CPT1BQ92523 772 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 P2RY12Q9H244 342 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 LATS2Q9NRM7 1088 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 GEMIN8Q9NWZ8 242 aaKnown RBP16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 SAMD15Q9P1V8 674 aa16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 TLN1Q9Y490 2541 aaKnown RBP16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 HELZ2Q9BYK8 2649 aaKnown RBP16.22■□□□□ 0.19
CACNA1A-259ENST00000638114 GOLGA6L10A0A0M3HER8 536 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 C21orf140B9A014 251 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 GOLGA8MH3BSY2 632 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 PHF2O75151 1096 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 GPC4O75487 556 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 RPN2P04844 631 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 TPBGLP0DKB5 382 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 PLA2G2AP14555 144 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 PAMP19021 973 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 CYP2A7P20853 494 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 RPS3P23396 243 aaKnown RBP eCLIP16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 AOAHP28039 575 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 ERV3-1Q14264 604 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 CRTC2Q53ET0 693 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 PRAMEF17Q5VTA0 474 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 KIAA0930Q6ICG6 404 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 FAM199XQ6PEV8 388 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 CAND1Q86VP6 1230 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 ACTRT1Q8TDG2 376 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 MR1Q95460 341 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 ADNPQ9H2P0 1102 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 AKIRIN1Q9H9L7 192 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 SYTL2Q9HCH5 934 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 SPHK1Q9NYA1 384 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 OR6C2Q9NZP2 312 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 SNX12Q9UMY4 172 aa16.21■□□□□ 0.19
CACNA1A-259ENST00000638114 SPTBP11277 2137 aa16.21■□□□□ 0.18
CACNA1A-259ENST00000638114 BOD1L1Q8NFC6 3051 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 ISM1B1AKI9 464 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 KPNA5O15131 536 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 PFDN6O15212 129 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 SLCO2B1O94956 709 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 PKLRP30613 574 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 GPS2Q13227 327 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 KCNAB2Q13303 367 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 RNF187Q5TA31 235 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 UNC5DQ6UXZ4 953 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 CDHR3Q6ZTQ4 885 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 OTOAQ7RTW8 1153 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 DCUN1D3Q8IWE4 304 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 C19orf47Q8N9M1 422 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 OR1L3Q8NH93 324 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 GRK7Q8WTQ7 553 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 SKA2Q8WVK7 121 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 APOBEC4Q8WW27 367 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 ANP32BQ92688 251 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 N4BP2L2Q92802 583 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 CLIP3Q96DZ5 547 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 OR2A14Q96R47 310 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 RUFY1Q96T51 708 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 TRIM56Q9BRZ2 755 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 FAM117AQ9C073 453 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 SLC7A5P2Q9GIP4 190 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 ACTL8Q9H568 366 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 XAB2Q9HCS7 855 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 STARD5Q9NSY2 213 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 CIDEBQ9UHD4 219 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 SERTAD3Q9UJW9 196 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 PCDHGA6Q9Y5G7 932 aa16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 HEMK1Q9Y5R4 338 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-259ENST00000638114 A0A0J9YY10 115 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 CDC14CA4D256 554 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 ZNF185O15231 689 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 CREG1O75629 220 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 KLK3P07288 261 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 MSL3P1P0C860 447 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 MLNP12872 115 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 FMO4P31512 558 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 FNTAP49354 379 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 RAB28P51157 221 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms