RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 BFARQ9NZS9 450 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 TSR3Q9UJK0 312 aaKnown RBP17.16■□□□□ 0.34
PNKP-230ENST00000638016 PADI1Q9ULC6 663 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 JRKLQ9Y4A0 524 aa17.16■□□□□ 0.34
PNKP-230ENST00000638016 PIPSLA2A3N6 862 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 C2orf74A8MZ97 194 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 GOLGA8MH3BSY2 632 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 PRMT5O14744 637 aaPredicted RBP17.15■□□□□ 0.34
PNKP-230ENST00000638016 GPC4O75487 556 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 CHRM5P08912 532 aaPredicted RBP17.15■□□□□ 0.34
PNKP-230ENST00000638016 COILP38432 576 aaPredicted RBP17.15■□□□□ 0.34
PNKP-230ENST00000638016 NPY2RP49146 381 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 TMTC4Q5T4D3 741 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 SPESP1Q6UW49 350 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 C4orf22Q6V702 233 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 TAX1BP1Q86VP1 789 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 CAND1Q86VP6 1230 aaKnown RBP17.15■□□□□ 0.34
PNKP-230ENST00000638016 TBC1D21Q8IYX1 336 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 SLC22A15Q8IZD6 547 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 AGGF1Q8N302 714 aaeCLIP17.15■□□□□ 0.34
PNKP-230ENST00000638016 OTUD6BQ8N6M0 293 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 TTC1Q99614 292 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 EFHD1Q9BUP0 239 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 TRIM4Q9C037 500 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 KCND1Q9NSA2 647 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 GEMIN8Q9NWZ8 242 aaKnown RBP17.15■□□□□ 0.34
PNKP-230ENST00000638016 ANAPC5Q9UJX4 755 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 SOX13Q9UN79 622 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 KLHL20Q9Y2M5 609 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 NEU2Q9Y3R4 380 aa17.15■□□□□ 0.34
PNKP-230ENST00000638016 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.14■□□□□ 0.33
PNKP-230ENST00000638016 CDC14CA4D256 554 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 USP27XA6NNY8 438 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 MATN2O00339 956 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 SLC28A2O43868 658 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 CPNE3O75131 537 aaKnown RBP17.14■□□□□ 0.33
PNKP-230ENST00000638016 CCNYL3P0C7X3 344 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 ATXN8OSP0DMR3 200 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 AOAHP28039 575 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 SHMT2P34897 504 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 CCR10P46092 362 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 EIF3BP55884 814 aaKnown RBP17.14■□□□□ 0.33
PNKP-230ENST00000638016 KCNAB2Q13303 367 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 GRB7Q14451 532 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 AARS2Q5JTZ9 985 aaKnown RBP17.14■□□□□ 0.33
PNKP-230ENST00000638016 PTRHD1Q6GMV3 140 aaKnown RBP17.14■□□□□ 0.33
PNKP-230ENST00000638016 PRICKLE2Q7Z3G6 844 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 PTRH1Q86Y79 214 aaKnown RBP17.14■□□□□ 0.33
PNKP-230ENST00000638016 LINC01555Q8NAE3 123 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 MR1Q95460 341 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 PBKQ96KB5 322 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 OSBPL9Q96SU4 736 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 MENTQ9BUN1 341 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 CARD6Q9BX69 1037 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 ACTL8Q9H568 366 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 HOMER3Q9NSC5 361 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 NFS1Q9Y697 457 aa17.14■□□□□ 0.33
PNKP-230ENST00000638016 MED13Q9UHV7 2174 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 NIPSNAP2O75323 286 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 NR1D1P20393 614 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 PKLRP30613 574 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 MAGEA6P43360 314 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 BDKRB1P46663 353 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 TTPAP49638 278 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 IL10RAQ13651 578 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 CYP1B1Q16678 543 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 PTCHD3Q3KNS1 767 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 CCSMST1Q4G0I0 132 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 COLEC12Q5KU26 742 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 PLEKHS1Q5SXH7 462 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 CYB5D1Q6P9G0 228 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 CCDC137Q6PK04 289 aaKnown RBP17.13■□□□□ 0.33
PNKP-230ENST00000638016 CARFQ8N187 725 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 C19orf47Q8N9M1 422 aaKnown RBP17.13■□□□□ 0.33
PNKP-230ENST00000638016 CATSPER2Q96P56 530 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 FCRL4Q96PJ5 515 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 TWSG1Q9GZX9 223 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 CHST8Q9H2A9 424 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 MRM3Q9HC36 420 aaKnown RBP17.13■□□□□ 0.33
PNKP-230ENST00000638016 ZNF71Q9NQZ8 489 aaPredicted RBP17.13■□□□□ 0.33
PNKP-230ENST00000638016 GALPQ9UBC7 116 aa17.13■□□□□ 0.33
PNKP-230ENST00000638016 K7EM74 188 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 PGRMC1O00264 195 aaKnown RBP17.12■□□□□ 0.33
PNKP-230ENST00000638016 NDUFS3O75489 264 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 CREG1O75629 220 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 MT-ND3P03897 115 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 APOA4P06727 396 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 FMO4P31512 558 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 RORAP35398 523 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 GABRA4P48169 554 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 CDK16Q00536 496 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 DNAJC21Q5F1R6 531 aaKnown RBP17.12■□□□□ 0.33
PNKP-230ENST00000638016 CASC4Q6P4E1 433 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 BPHLQ86WA6 291 aaPredicted RBP17.12■□□□□ 0.33
PNKP-230ENST00000638016 LPGAT1Q92604 370 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 BIRC8Q96P09 236 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 SLC25A18Q9H1K4 315 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 LATS2Q9NRM7 1088 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 PCMTD2Q9NV79 361 aa17.12■□□□□ 0.33
PNKP-230ENST00000638016 GNPTGQ9UJJ9 305 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms