RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 SPOCD1Q6ZMY3 1216 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 CDHR3Q6ZTQ4 885 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 ENOSF1Q7L5Y1 443 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 ZNF227Q86WZ6 799 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 SLC34A3Q8N130 599 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 ANKRD52Q8NB46 1076 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 TRPV1Q8NER1 839 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 MAFIPQ8WZ33 124 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 CREB3L1Q96BA8 519 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 NKX6-2Q9C056 277 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 SMURF1Q9HCE7 757 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 AGPAT3Q9NRZ7 376 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 C1orf112Q9NSG2 853 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 LYARQ9NX58 379 aaKnown RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 CLCA3PQ9Y6N3 262 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 TUBGCP6Q96RT7 1819 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 CNTNAP5Q8WYK1 1306 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 IRS2Q9Y4H2 1338 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 C10orf71Q711Q0 1435 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 CLDN24A6NM45 220 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 BBIP1A8MTZ0 92 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 TPP1O14773 563 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 EIF1BO60739 113 aaKnown RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 LILRB5O75023 590 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 ATG7O95352 703 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 LALBAP00709 142 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 TPOP07202 933 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 CSF1RP07333 972 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 ZNF14P17017 642 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 EIF1P41567 113 aaKnown RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 PSMC5P62195 406 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 GABREP78334 506 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 ZSWIM7Q19AV6 140 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 CYBRD1Q53TN4 286 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 PRAMEF13Q5VWM6 474 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 SLC25A25Q6KCM7 469 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 ZER1Q7Z7L7 766 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 CDYL2Q8N8U2 506 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 GRAPLQ8TC17 118 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 LPPQ93052 612 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 ROPN1LQ96C74 230 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 LRRC46Q96FV0 321 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 TNKS2Q9H2K2 1166 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 C11orf49Q9H6J7 331 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 NMUR1Q9HB89 426 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 CRLF2Q9HC73 371 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 NFKBIL1Q9UBC1 381 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 DNMT3BQ9UBC3 853 aaKnown RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 SETBP1Q9Y6X0 1596 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 A0A1W2PQ09 198 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 MFSD2BA6NFX1 497 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 HSPA12AO43301 675 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 PROM1O43490 865 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 TSPAN12O95859 305 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 CD2P06729 351 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 THEGLP0DJG4 465 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 NFKB1P19838 968 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 POLR2IP36954 125 aaKnown RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 RORCP51449 518 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 NR0B1P51843 470 aaKnown RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 CASP6P55212 293 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 CDH8P55286 799 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 GLO1Q04760 184 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 TFDP2Q14188 446 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 KRT33BQ14525 404 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 PSMD5Q16401 504 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 AOC3Q16853 763 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 GPR33Q49SQ1 333 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 C9orf152Q5JTZ5 239 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 RAET1GQ6H3X3 334 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 AHSA2Q719I0 299 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 CEP68Q76N32 757 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 PROSER1Q86XN7 944 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 ZFPM1Q8IX07 1006 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 ZZZ3Q8IYH5 903 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 TTC16Q8NEE8 873 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 C2CD4CQ8TF44 421 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 AP3S1Q92572 193 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 TMEM41AQ96HV5 264 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 LINC00052Q96N35 136 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 ZNF341Q9BYN7 854 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 NCOR1P1Q9H4R4 102 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 INTS6Q9UL03 887 aaKnown RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 SLC6A14Q9UN76 642 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 SLC9A8Q9Y2E8 581 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 KCNIP3Q9Y2W7 256 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 FRMPD1Q5SYB0 1578 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 SMLR1H3BR10 107 aa5.63□□□□□ -1.51
SCN1A-216ENST00000637968 H7C0S8 307 aa5.63□□□□□ -1.51
SCN1A-216ENST00000637968 UBXN8O00124 270 aa5.63□□□□□ -1.51
SCN1A-216ENST00000637968 FABP7O15540 132 aa5.63□□□□□ -1.51
SCN1A-216ENST00000637968 AGR2O95994 175 aa5.63□□□□□ -1.51
SCN1A-216ENST00000637968 PAK4O96013 591 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-216ENST00000637968 MT-ND1P03886 318 aa5.63□□□□□ -1.51
SCN1A-216ENST00000637968 SLC2A2P11168 524 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-216ENST00000637968 CKMT1AP12532 417 aa5.63□□□□□ -1.51
SCN1A-216ENST00000637968 MPSTP25325 297 aa5.63□□□□□ -1.51
SCN1A-216ENST00000637968 FMO3P31513 532 aa5.63□□□□□ -1.51
SCN1A-216ENST00000637968 EMX1Q04741 257 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-216ENST00000637968 TEX30Q5JUR7 227 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms