RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 C2orf81A6NN90 581 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 ALOX12BO75342 701 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 KRT1P04264 644 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 ATP1B2P14415 290 aaPredicted RBP19.41■□□□□ 0.7
TARDBP-228ENST00000629725 MMP11P24347 488 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 GABRA4P48169 554 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 TLR1Q15399 786 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 ZIC1Q15915 447 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 TLDC1Q6P9B6 456 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 FAM180AQ6UWF9 173 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 PID1Q7Z2X4 250 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 TRIM73Q86UV7 250 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 SLX1AQ9BQ83 275 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 CHRNA10Q9GZZ6 450 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 EPS8L2Q9H6S3 715 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 FKBPLQ9UIM3 349 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 CDC23Q9UJX2 597 aa19.41■□□□□ 0.7
TARDBP-228ENST00000629725 SNRNP200O75643 2136 aaKnown RBP19.4■□□□□ 0.7
TARDBP-228ENST00000629725 AGAP14A8MT82 685 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 CFAP99D6REC4 459 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 CTSBP07858 339 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 UGT2B7P16662 529 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 PDHA2P29803 388 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 ART3Q13508 389 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 TAF1AQ15573 450 aaPredicted RBP19.4■□□□□ 0.7
TARDBP-228ENST00000629725 FCRL6Q6DN72 434 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 ZNF449Q6P9G9 518 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 ZNF567Q8N184 647 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 TFGQ92734 400 aaPredicted RBP19.4■□□□□ 0.7
TARDBP-228ENST00000629725 ULK4Q96C45 1275 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 VAT1Q99536 393 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 COPS8Q99627 209 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 NDC1Q9BTX1 674 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 OLAHQ9NV23 265 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 CAPN11Q9UMQ6 739 aa19.4■□□□□ 0.7
TARDBP-228ENST00000629725 JRKO75564 520 aa19.39■□□□□ 0.69
TARDBP-228ENST00000629725 ALAS2P22557 587 aa19.39■□□□□ 0.69
TARDBP-228ENST00000629725 XIAPP98170 497 aa19.39■□□□□ 0.69
TARDBP-228ENST00000629725 BOP1Q14137 746 aaKnown RBP19.39■□□□□ 0.69
TARDBP-228ENST00000629725 GDF7Q7Z4P5 450 aa19.39■□□□□ 0.69
TARDBP-228ENST00000629725 PARP9Q8IXQ6 854 aa19.39■□□□□ 0.69
TARDBP-228ENST00000629725 NXPE1Q8N323 547 aa19.39■□□□□ 0.69
TARDBP-228ENST00000629725 BCORP1Q8N888 145 aa19.39■□□□□ 0.69
TARDBP-228ENST00000629725 HEXDCQ8WVB3 486 aa19.39■□□□□ 0.69
TARDBP-228ENST00000629725 OR2A14Q96R47 310 aa19.39■□□□□ 0.69
TARDBP-228ENST00000629725 VPS37BQ9H9H4 285 aa19.39■□□□□ 0.69
TARDBP-228ENST00000629725 ICKQ9UPZ9 632 aa19.39■□□□□ 0.69
TARDBP-228ENST00000629725 LUC7L2Q9Y383 392 aaKnown RBP19.39■□□□□ 0.69
TARDBP-228ENST00000629725 KLF2Q9Y5W3 355 aaPredicted RBP19.39■□□□□ 0.69
TARDBP-228ENST00000629725 A0A0J9YY10 115 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 C5orf60A6NFR6 353 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 GOLGA6L22H0YM25 854 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 SOCS6O14544 535 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 AGTP01019 485 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 PECAM1P16284 738 aaPredicted RBP19.38■□□□□ 0.69
TARDBP-228ENST00000629725 SHMT2P34897 504 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 PTGER4P35408 488 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 OTUD4Q01804 1114 aaKnown RBP19.38■□□□□ 0.69
TARDBP-228ENST00000629725 RPA4Q13156 261 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 ZNF658BQ4V348 819 aaPredicted RBP19.38■□□□□ 0.69
TARDBP-228ENST00000629725 MFSD7Q6UXD7 560 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 UNC5AQ6ZN44 842 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 SLC35G2Q8TBE7 412 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 RELTQ969Z4 430 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 LHPPQ9H008 270 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 FAM96AQ9H5X1 160 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 SLC22A11Q9NSA0 550 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 RSPH14Q9UHP6 348 aa19.38■□□□□ 0.69
TARDBP-228ENST00000629725 PKDREJQ9NTG1 2253 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 CCDC78A2IDD5 438 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 PBX1P40424 430 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 ARHGAP25P42331 645 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 TMPRSS15P98073 1019 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 TFDP2Q14188 446 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 SLC18A3Q16572 532 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 LRRC38Q5VT99 294 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 RPUSD3Q6P087 351 aaKnown RBP19.37■□□□□ 0.69
TARDBP-228ENST00000629725 SNX20Q7Z614 316 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 DLG3Q92796 817 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 FKBP10Q96AY3 582 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 IQCDQ96DY2 449 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 LURAP1Q96LR2 239 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 WDR54Q9H977 334 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 DDX56Q9NY93 547 aaKnown RBP19.37■□□□□ 0.69
TARDBP-228ENST00000629725 SPHK1Q9NYA1 384 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 PLCL2Q9UPR0 1127 aa19.37■□□□□ 0.69
TARDBP-228ENST00000629725 CST8O60676 142 aa19.36■□□□□ 0.69
TARDBP-228ENST00000629725 ALBP02768 609 aa19.36■□□□□ 0.69
TARDBP-228ENST00000629725 CHRM5P08912 532 aaPredicted RBP19.36■□□□□ 0.69
TARDBP-228ENST00000629725 TMEM253P0C7T8 217 aa19.36■□□□□ 0.69
TARDBP-228ENST00000629725 TNNT1P13805 278 aa19.36■□□□□ 0.69
TARDBP-228ENST00000629725 ITGALP20701 1170 aa19.36■□□□□ 0.69
TARDBP-228ENST00000629725 KAZNQ674X7 775 aa19.36■□□□□ 0.69
TARDBP-228ENST00000629725 KIRREL2Q6UWL6 708 aa19.36■□□□□ 0.69
TARDBP-228ENST00000629725 LINC00696Q6ZRV3 163 aa19.36■□□□□ 0.69
TARDBP-228ENST00000629725 TTLL10Q6ZVT0 673 aa19.36■□□□□ 0.69
TARDBP-228ENST00000629725 OVCH1Q7RTY7 1134 aa19.36■□□□□ 0.69
TARDBP-228ENST00000629725 DNAJC22Q8N4W6 341 aa19.36■□□□□ 0.69
TARDBP-228ENST00000629725 OR5AR1Q8NGP9 310 aa19.36■□□□□ 0.69
TARDBP-228ENST00000629725 OR13C4Q8NGS5 318 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms