RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 TMEM220Q6QAJ8 160 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 AFTPHQ6ULP2 937 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 STRA8Q7Z7C7 330 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 EXOC3L1Q86VI1 746 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 BEND7Q8N7W2 519 aaPredicted RBP12.36□□□□□ -0.43
PNKP-217ENST00000625216 RASGEF1AQ8N9B8 481 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 C2CD4AQ8NCU7 369 aaPredicted RBP12.36□□□□□ -0.43
PNKP-217ENST00000625216 OR6P1Q8NGX9 317 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 HEXDCQ8WVB3 486 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 SLC39A7Q92504 469 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 RBBP8Q99708 897 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 ZPBPQ9BS86 351 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 ASB8Q9H765 288 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 FBXO6Q9NRD1 293 aaPredicted RBP12.36□□□□□ -0.43
PNKP-217ENST00000625216 SLC39A1Q9NY26 324 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 OGFRQ9NZT2 677 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 FOXJ2Q9P0K8 574 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 TMEM9Q9P0T7 183 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 SCHIP1Q9P0W5 487 aaPredicted RBP12.36□□□□□ -0.43
PNKP-217ENST00000625216 FBXO5Q9UKT4 447 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 IKBKGQ9Y6K9 419 aa12.36□□□□□ -0.43
PNKP-217ENST00000625216 IQANK1A0A1B0GTG1 560 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 AGAP14A8MT82 685 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 AGRPO00253 132 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 GPR39O43194 453 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 UBXN7O94888 489 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 PRAMEF1O95521 474 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 ANKRD34CP0C6C1 535 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 RALBP11234 206 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 BRAFP15056 766 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 AMD1P17707 334 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 KRT15P19012 456 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 OGNP20774 298 aaKnown RBP12.35□□□□□ -0.43
PNKP-217ENST00000625216 RPL10P27635 214 aaKnown RBP12.35□□□□□ -0.43
PNKP-217ENST00000625216 ATP5DP30049 168 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 MC4RP32245 332 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 SERPINB9P50453 376 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 MC2RQ01718 297 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 TGIF1Q15583 401 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 MANEAQ5SRI9 462 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 DCAF12Q5T6F0 453 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 LDB1Q86U70 411 aaPredicted RBP12.35□□□□□ -0.43
PNKP-217ENST00000625216 ZFAND4Q86XD8 727 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 SRRM1Q8IYB3 904 aaKnown RBP12.35□□□□□ -0.43
PNKP-217ENST00000625216 OTUD6BQ8N6M0 293 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 OR4L1Q8NH43 312 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 ULK4Q96C45 1275 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 CXorf40BQ96DE9 158 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 PKNOX2Q96KN3 472 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 TBC1D10AQ9BXI6 508 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 STMN4Q9H169 189 aaPredicted RBP12.35□□□□□ -0.43
PNKP-217ENST00000625216 SLC40A1Q9NP59 571 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 FBXO8Q9NRD0 319 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 CATSPERZQ9NTU4 200 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 NSMCE4AQ9NXX6 385 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 KIF26BQ2KJY2 2108 aa12.35□□□□□ -0.43
PNKP-217ENST00000625216 SMG1Q96Q15 3661 aaKnown RBP12.35□□□□□ -0.43
PNKP-217ENST00000625216 MN1Q10571 1320 aaPredicted RBP12.35□□□□□ -0.43
PNKP-217ENST00000625216 MGAT4DA6NG13 374 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 EFCAB7A8K855 629 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 EFSO43281 561 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 C9P02748 559 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 SNRPAP09012 282 aaKnown RBP12.34□□□□□ -0.43
PNKP-217ENST00000625216 NR1D1P20393 614 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 AKT1P31749 480 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 CA5AP35218 305 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 MAPK9P45984 424 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 CDKN1CP49918 316 aaPredicted RBP12.34□□□□□ -0.43
PNKP-217ENST00000625216 ATP1A2P50993 1020 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 CTSCP53634 463 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 CLCA4Q14CN2 919 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 SEPT7Q16181 437 aaKnown RBP12.34□□□□□ -0.43
PNKP-217ENST00000625216 TYSND1Q2T9J0 566 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 GPR33Q49SQ1 333 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 BCL7AQ4VC05 210 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 TAF1BQ53T94 588 aaPredicted RBP12.34□□□□□ -0.43
PNKP-217ENST00000625216 SNAP47Q5SQN1 464 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 GRTP1Q5TC63 336 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 MROH9Q5TGP6 573 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 METRNLQ641Q3 311 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 KLHL35Q6PF15 583 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 XKR5Q6UX68 686 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 KIAA0408Q6ZU52 694 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 TAOK1Q7L7X3 1001 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 ZC3HC1Q86WB0 502 aaKnown RBP12.34□□□□□ -0.43
PNKP-217ENST00000625216 FAM129CQ86XR2 697 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 CILP2Q8IUL8 1156 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 LMNTD2Q8IXW0 634 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 BMPERQ8N8U9 685 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 ZSCAN1Q8NBB4 408 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 ACVR1CQ8NER5 493 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 GPR150Q8NGU9 434 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 CALML6Q8TD86 181 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 ZFPM2Q8WW38 1151 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 DCUN1D1Q96GG9 259 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 VPS39Q96JC1 886 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 LINC00615Q96LM1 132 aaPredicted RBP12.34□□□□□ -0.43
PNKP-217ENST00000625216 RAB33BQ9H082 229 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 RHOJQ9H4E5 214 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 OCIAD1Q9NX40 245 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms