RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ST6GAL1P15907 406 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 ARNTP27540 789 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 OAS2P29728 719 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 PPARGP37231 505 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 PLOD1Q02809 727 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 C2orf54Q08AI8 447 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 CDC20Q12834 499 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 GPS1Q13098 491 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 KCNJ11Q14654 390 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 AARS2Q5JTZ9 985 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 TMTC4Q5T4D3 741 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 ATP1A1-AS1Q5TC04 95 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 UNC5AQ6ZN44 842 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 TBC1D21Q8IYX1 336 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 KRT222Q8N1A0 295 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 OR5K2Q8NHB8 316 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 MFSD3Q96ES6 412 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 KIFC1Q9BW19 673 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 CARD6Q9BX69 1037 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 KLHL25Q9H0H3 589 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 LHX9Q9NQ69 397 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 ACTR10Q9NZ32 417 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 PCYOX1Q9UHG3 505 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 TDRKHQ9Y2W6 561 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 C2orf74A8MZ97 194 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 F8W8V4 182 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 PRMT5O14744 637 aaPredicted RBP17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 AVILO75366 819 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 GPC4O75487 556 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 MT-ND3P03897 115 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 PLA2G2AP14555 144 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 PVRP15151 417 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 TCN2P20062 427 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 MAGEA6P43360 314 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 TTPAP49638 278 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 SARNPP82979 210 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 HSPA14Q0VDF9 509 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 PRAMEF17Q5VTA0 474 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 ANKRD22Q5VYY1 191 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 C16orf46Q6P387 395 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 FAM199XQ6PEV8 388 aaPredicted RBP17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 SLC22A15Q8IZD6 547 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 SLC38A9Q8NBW4 561 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 CT55Q8WUE5 264 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 CATSPER2Q96P56 530 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 TRAPPC9Q96Q05 1148 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 P2RY12Q9H244 342 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 MRM3Q9HC36 420 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 GEMIN8Q9NWZ8 242 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 POLG2Q9UHN1 485 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 PLAGL1Q9UM63 463 aa17.39■□□□□ 0.37
SCAMP4-213ENST00000621748 PIPSLA2A3N6 862 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 FAM187AA6NFU0 413 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 KATNA1O75449 491 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 SCRG1O75711 98 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 VAPBO95292 243 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 AOAHP28039 575 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 SHMT2P34897 504 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 MC1RQ01726 317 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 NFATC3Q12968 1075 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 ABRQ12979 859 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 DNASE1L3Q13609 305 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 DEFB109BQ30KR1 87 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 CRTC2Q53ET0 693 aaPredicted RBP17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 C8orf74Q6P047 294 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 ZNF572Q7Z3I7 529 aaPredicted RBP17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 PCGF5Q86SE9 256 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 TRIM73Q86UV7 250 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 CAND1Q86VP6 1230 aaKnown RBP17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 TMEM126BQ8IUX1 230 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 MPP5Q8N3R9 675 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 OR8K5Q8NH50 307 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 OR2A14Q96R47 310 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 RUFY1Q96T51 708 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 TWSG1Q9GZX9 223 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 RAB17Q9H0T7 212 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 STARD5Q9NSY2 213 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 SPHK1Q9NYA1 384 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 SOX13Q9UN79 622 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 UTP11Q9Y3A2 253 aaKnown RBP17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 NEU2Q9Y3R4 380 aa17.38■□□□□ 0.37
SCAMP4-213ENST00000621748 GOLGA8KD6RF30 607 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 GOLGA8TH3BQL2 631 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 NDUFS3O75489 264 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 TMEM63AO94886 807 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 CHRM5P08912 532 aaPredicted RBP17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 FURINP09958 794 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 SFTPCP11686 197 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 UGT2B7P16662 529 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 CCR10P46092 362 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 POLE2P56282 527 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 GPS2Q13227 327 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 ERV3-1Q14264 604 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 DNAJC21Q5F1R6 531 aaKnown RBP17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 ZNF789Q5FWF6 425 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 PTRHD1Q6GMV3 140 aaKnown RBP17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 SPESP1Q6UW49 350 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 OR1L3Q8NH93 324 aa17.37■□□□□ 0.37
SCAMP4-213ENST00000621748 FLVCR1-AS1Q8TAF5 88 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms