RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 INHBCP55103 352 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 VSNL1P62760 191 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 KRT33BQ14525 404 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 C16orf72Q14CZ0 275 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 ARHGAP22Q7Z5H3 698 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 DCUN1D3Q8IWE4 304 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 ADGRF3Q8IZF5 1079 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 LMNTD1Q8N9Z9 388 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 LCN9Q8WX39 176 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 DLG3Q92796 817 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 GATA6Q92908 595 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 LIN37Q96GY3 246 aaPredicted RBP13.9□□□□□ -0.19
CBWD3-217ENST00000621474 PRR11Q96HE9 360 aaPredicted RBP13.9□□□□□ -0.19
CBWD3-217ENST00000621474 ELMO2Q96JJ3 720 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 CAB39LQ9H9S4 337 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 POLG2Q9UHN1 485 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 OR6C74A6NCV1 312 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 ARHGEF33A8MVX0 844 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 EIF3FO00303 357 aaPredicted RBP13.89□□□□□ -0.19
CBWD3-217ENST00000621474 BTN3A1O00481 513 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 KIF1CO43896 1103 aaKnown RBP13.89□□□□□ -0.19
CBWD3-217ENST00000621474 MPC1LP0DKB6 136 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 CBSLP0DN79 551 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 ENO3P13929 434 aaPredicted RBP13.89□□□□□ -0.19
CBWD3-217ENST00000621474 AMD1P17707 334 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 PHBP35232 272 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 CBSP35520 551 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 NAB1Q13506 487 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 ERCC6LQ2NKX8 1250 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 TTLL9Q3SXZ7 439 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 UGT3A1Q6NUS8 523 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 LINC01555Q8NAE3 123 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 DENND1AQ8TEH3 1009 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 SKA2Q8WVK7 121 aaPredicted RBP13.89□□□□□ -0.19
CBWD3-217ENST00000621474 ASB11Q8WXH4 323 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 PPM1MQ96MI6 270 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 TMEM74Q96NL1 305 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 CYTH2Q99418 400 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 DPYSL5Q9BPU6 564 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 HRASLS2Q9NWW9 162 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 IKZF3Q9UKT9 509 aa13.89□□□□□ -0.19
CBWD3-217ENST00000621474 TDRKHQ9Y2W6 561 aaKnown RBP13.89□□□□□ -0.19
CBWD3-217ENST00000621474 DMXL2Q8TDJ6 3036 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 GFYI3L273 518 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 RIPK2O43353 540 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 ITGA2BP08514 1039 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 PEBP1P30086 187 aaKnown RBP13.88□□□□□ -0.19
CBWD3-217ENST00000621474 PKLRP30613 574 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 CSRP3P50461 194 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 KPNA2P52292 529 aaKnown RBP13.88□□□□□ -0.19
CBWD3-217ENST00000621474 PMS2P54278 862 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 PDAP1Q13442 181 aaKnown RBP13.88□□□□□ -0.19
CBWD3-217ENST00000621474 ZKSCAN8Q15776 578 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-217ENST00000621474 GRTP1Q5TC63 336 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 AMIGO1Q86WK6 493 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 PLXDC1Q8IUK5 500 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 FLVCR1-AS1Q8TAF5 88 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 UHMK1Q8TAS1 419 aaKnown RBP13.88□□□□□ -0.19
CBWD3-217ENST00000621474 ANKRD49Q8WVL7 239 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 GRAMD1AQ96CP6 724 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 IL17FQ96PD4 163 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 TGM7Q96PF1 710 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 SRMSQ9H3Y6 488 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 SEMA5BQ9P283 1151 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 TXNDC16Q9P2K2 825 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 KLHL3Q9UH77 587 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 ADAMTS6Q9UKP5 1117 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 SATB2Q9UPW6 733 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 TPRP12270 2363 aaKnown RBP13.88□□□□□ -0.19
CBWD3-217ENST00000621474 IGF2RP11717 2491 aa13.88□□□□□ -0.19
CBWD3-217ENST00000621474 AGRPO00253 132 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 CAPNS1P04632 268 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 MPOP05164 745 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 ABHD2P08910 425 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 ANKRD34CP0C6C1 535 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 POLR2CP19387 275 aaPredicted RBP13.87□□□□□ -0.19
CBWD3-217ENST00000621474 SAT1P21673 171 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 GCAP28676 217 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 RAB28P51157 221 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 TUBB4BP68371 445 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 POU4F1Q01851 419 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 TRA2AQ13595 282 aaKnown RBP eCLIP13.87□□□□□ -0.19
CBWD3-217ENST00000621474 SNAP47Q5SQN1 464 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 PHF19Q5T6S3 580 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 WDR93Q6P2C0 686 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 FAM92BQ6ZTR7 304 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 TRMT10CQ7L0Y3 403 aaKnown RBP13.87□□□□□ -0.19
CBWD3-217ENST00000621474 OOSP2Q86WS3 158 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 SLC44A1Q8WWI5 657 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 MRRFQ96E11 262 aaKnown RBP13.87□□□□□ -0.19
CBWD3-217ENST00000621474 LINGO1Q96FE5 620 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 NRSN2Q9GZP1 204 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 SPHK1Q9NYA1 384 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 SLC39A10Q9ULF5 831 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 APC2O95996 2303 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 HEATR5BQ9P2D3 2071 aa13.87□□□□□ -0.19
CBWD3-217ENST00000621474 TRABD2BA6NFA1 517 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 A8MU76 341 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 MYO1CO00159 1063 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 RASGRF2O14827 1237 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms