RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 PIGZQ86VD9 579 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 COMMD2Q86X83 199 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 OR6Q1Q8NGQ2 317 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SLC35B4Q969S0 331 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 HIST1H2AHQ96KK5 128 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 HIST1H2AJQ99878 128 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 DPH2Q9BQC3 489 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 H2AFJQ9BTM1 129 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 COPZ2Q9P299 210 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 MLYCDO95822 493 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 GRB7Q14451 532 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 KLHL24Q6TFL4 600 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SHFQ7M4L6 423 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ANKS1BQ7Z6G8 1248 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 DNAJC5GQ8N7S2 189 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 PSD2Q9BQI7 771 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 CD320Q9NPF0 282 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 RASGRP1O95267 797 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SIX3O95343 332 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 RAP2AP10114 183 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 DSTNP60981 165 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 CDH17Q12864 832 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ATP6AP1Q15904 470 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 TCEAL3Q969E4 200 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 NXPE2Q96DL1 559 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 FYTTD1Q96QD9 318 aaKnown RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ADAM28Q9UKQ2 775 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ALDOBP05062 364 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 PCBP2Q15366 365 aaKnown RBP eCLIP4.95□□□□□ -1.623e-9■■■□□ 17.8
VPS13D-214ENST00000620676 CYP1B1Q16678 543 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 BEX5Q5H9J7 111 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 PODNQ7Z5L7 613 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 NRARPQ7Z6K4 114 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 TDRPQ86YL5 185 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ZDHHC14Q8IZN3 488 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SLC25A36Q96CQ1 311 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 P2RY11Q96G91 374 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 WDR18Q9BV38 432 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 FNDC11Q9BVV2 318 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 USP6P35125 1406 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 STAT5AP42229 794 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 CDC42EP5Q6NZY7 148 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 USP45Q70EL2 814 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 OTOP1Q7RTM1 612 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ZDHHC21Q8IVQ6 265 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 LGALS12Q96DT0 336 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ITPKCQ96DU7 683 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SEPT5Q99719 369 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SLC30A4O14863 429 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 UCHL1P09936 223 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 NIPAL4Q0D2K0 466 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 HSPA14Q0VDF9 509 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 PMF1Q6P1K2 205 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 INO80EQ8NBZ0 244 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 TMEM185AQ8NFB2 350 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 CLPBQ9H078 707 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SLC2A6Q9UGQ3 507 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 RFXANKO14593 260 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SOX14O95416 240 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 OR4D2P58180 307 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ST3GAL4Q11206 333 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 NOMO2Q5JPE7 1267 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 HECTD2Q5U5R9 776 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 MARCH9Q86YJ5 346 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 CDCP1Q9H5V8 836 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ENAMQ9NRM1 1142 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 AGLP35573 1532 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 PRSS44E7EML9 344 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SLC28A2O43868 658 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SLC6A3Q01959 620 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 EFCAB12Q6NXP0 572 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SLITRK4Q8IW52 837 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 TEX47Q8TBZ9 253 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 RAD51AP1Q96B01 352 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 MCCC1Q96RQ3 725 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 NIT2Q9NQR4 276 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ACTR10Q9NZ32 417 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 USP21Q9UK80 565 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 FGF3P11487 239 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 LIMK2P53671 638 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ERVFC1P60507 584 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 PAN2Q504Q3 1202 aaKnown RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 NIM1KQ8IY84 436 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 IQCF1Q8N6M8 205 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SLC2A14Q8TDB8 520 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 MAGEB10Q96LZ2 347 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 RGS14O43566 566 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 H2AFB2P0C5Z0 115 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 OMPP47874 163 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 OR1E2P47887 323 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 PCLAFQ15004 111 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 CLPPQ16740 277 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF674Q2M3X9 581 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SCGB2B2Q4G0G5 96 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 TP53I13Q8NBR0 393 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 THAP6Q8TBB0 222 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 AUTS2Q8WXX7 1259 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 PANX1Q96RD7 426 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 OR51E2Q9H255 320 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 NCAPD2Q15021 1401 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms