RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 KLHL20Q9Y2M5 609 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 TNPO3Q9Y5L0 923 aaKnown RBP10.18□□□□□ -0.78
VPS11-207ENST00000620429 U3KQ87 197 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 A0A0U1RQS6 177 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 A0A1B0GVM2 712 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 BTN3A3O00478 584 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 DPYSL4O14531 572 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 KATNA1O75449 491 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 LRIG2O94898 1065 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 ECDO95905 644 aaPredicted RBP10.18□□□□□ -0.78
VPS11-207ENST00000620429 IQCF3P0C7M6 154 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 RRASP10301 218 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 FSHRP23945 695 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 DGKQP52824 942 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 SLC35A2P78381 396 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 ANGPT1Q15389 498 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 TAB1Q15750 504 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 GRK1Q15835 563 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 GLYATQ6IB77 296 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 LRRTM3Q86VH5 581 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 VWA5B2Q8N398 1253 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 CHCHD4Q8N4Q1 142 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 C12orf29Q8N999 325 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 SLC38A4Q969I6 547 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 ZNF669Q96BR6 464 aaPredicted RBP10.18□□□□□ -0.78
VPS11-207ENST00000620429 REPS1Q96D71 796 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 GPR137Q96N19 417 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 TTLL2Q9BWV7 592 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 SHARPINQ9H0F6 387 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 ERVK-18Q9QC07 812 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 ACAD8Q9UKU7 415 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 AGO1Q9UL18 857 aaKnown RBP10.18□□□□□ -0.78
VPS11-207ENST00000620429 HES2Q9Y543 173 aa10.18□□□□□ -0.78
VPS11-207ENST00000620429 CENPFP49454 3210 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 UBDO15205 165 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 CABYRO75952 493 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 TSPAN12O95859 305 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 TCF3P15923 654 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 ZP3P21754 424 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 MYL9P24844 172 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 PSMB4P28070 264 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 TIE1P35590 1138 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 MAP2K6P52564 334 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 DGCR6Q14129 220 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 GOLGA7BQ2TAP0 167 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 HKDC1Q2TB90 917 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 PYCR3Q53H96 274 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 CLLU1Q5K131 121 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 IER5Q5VY09 327 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 SYVN1Q86TM6 617 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 P3H2Q8IVL5 708 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 RIMKLAQ8IXN7 391 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 C3orf58Q8NDZ4 430 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 ZNF680Q8NEM1 530 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 TEX47Q8TBZ9 253 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 SPPL2BQ8TCT7 592 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 AP2M1Q96CW1 435 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 FCRL3Q96P31 734 aaPredicted RBP10.17□□□□□ -0.78
VPS11-207ENST00000620429 RBM14Q96PK6 669 aaKnown RBP10.17□□□□□ -0.78
VPS11-207ENST00000620429 CSPG4P5Q96PW8 444 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 AGAP2Q99490 1192 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 CYP4F12Q9HCS2 524 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 ACOT13Q9NPJ3 140 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 TMLHEQ9NVH6 421 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 USE1Q9NZ43 259 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 TINAGQ9UJW2 476 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 ACSL5Q9ULC5 683 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 ACOT9Q9Y305 439 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 TPRKBQ9Y3C4 175 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 MCM3APO60318 1980 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 A0A0B4J293 547 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 AIREO43918 545 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 SLC25A27O95847 323 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 PFKMP08237 780 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 PIGAP37287 484 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 PIK3CBP42338 1070 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 RECQLP46063 649 aaPredicted RBP10.17□□□□□ -0.78
VPS11-207ENST00000620429 ATP4BP51164 291 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 LIMK2P53671 638 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 SLC6A3Q01959 620 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 CDK5R2Q13319 367 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 OLIG2Q13516 323 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 PRPSAP1Q14558 356 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 DPYSL2Q16555 572 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 Q3ZCU0 254 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 EFCAB12Q6NXP0 572 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 LCLAT1Q6UWP7 414 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 RANBP10Q6VN20 620 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 HTR3DQ70Z44 454 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 OR8H3Q8N146 312 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 C9orf62Q8N4C0 152 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 TMBIM1Q969X1 311 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 RNF31Q96EP0 1072 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 PDLIM5Q96HC4 596 aaKnown RBP10.17□□□□□ -0.78
VPS11-207ENST00000620429 HYLS1Q96M11 299 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 FRMD6Q96NE9 622 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 ZIC5Q96T25 663 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 LDAHQ9H6V9 325 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 FAM49BQ9NUQ9 324 aa10.17□□□□□ -0.78
VPS11-207ENST00000620429 CYB5R1Q9UHQ9 305 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms