RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 ATOH8Q96SQ7 321 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 CCDC68Q9H2F9 335 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 ANGPTL2Q9UKU9 493 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 MED16Q9Y2X0 877 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 PCNX2A6NKB5 2137 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 CABIN1Q9Y6J0 2220 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 TMEM233B4DJY2 109 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 CTPS1P17812 591 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 RPL26P61254 145 aaKnown RBP21.09■□□□□ 0.97
SGMS1-210ENST00000619438 CYLC2Q14093 348 aaPredicted RBP21.09■□□□□ 0.97
SGMS1-210ENST00000619438 ARHGEF7Q14155 803 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 ACOX1Q15067 660 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 UNC50Q53HI1 259 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 AARS2Q5JTZ9 985 aaKnown RBP21.09■□□□□ 0.97
SGMS1-210ENST00000619438 C16orf89Q6UX73 402 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 USP45Q70EL2 814 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 ADGRG6Q86SQ4 1221 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 DEFB107AQ8IZN7 70 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 SLC22A18ASQ8N1D0 253 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 SAP25Q8TEE9 199 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 PHF21BQ96EK2 531 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 SCRN2Q96FV2 425 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 ZNF570Q96NI8 536 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 CDC6Q99741 560 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 MAGEE1Q9HCI5 957 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 NDE1Q9NXR1 346 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 BTBD3Q9Y2F9 522 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 STX7O15400 261 aaKnown RBP21.08■□□□□ 0.96
SGMS1-210ENST00000619438 KERAO60938 352 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 SRP72O76094 671 aaKnown RBP21.08■□□□□ 0.96
SGMS1-210ENST00000619438 RECQL5O94762 991 aaPredicted RBP21.08■□□□□ 0.96
SGMS1-210ENST00000619438 PYGLP06737 847 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 ADRB1P08588 477 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 FGF4P08620 206 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 MTHFD2P13995 350 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 MTTPP55157 894 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 PTK2BQ14289 1009 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 SHBQ15464 509 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 OR4D1Q15615 310 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 WSCD2Q2TBF2 565 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 ZNF542PQ5EBM4 170 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 NXNQ6DKJ4 435 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 RAB44Q7Z6P3 723 aaPredicted RBP21.08■□□□□ 0.96
SGMS1-210ENST00000619438 SNX32Q86XE0 403 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 FBXW8Q8N3Y1 598 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 NKAPQ8N5F7 415 aaKnown RBP21.08■□□□□ 0.96
SGMS1-210ENST00000619438 KYQ8NBH2 561 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 TP53I13Q8NBR0 393 aaPredicted RBP21.08■□□□□ 0.96
SGMS1-210ENST00000619438 STAG3L4Q8TBR4 150 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 BIRC8Q96P09 236 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 TRAF6Q9Y4K3 522 aa21.08■□□□□ 0.96
SGMS1-210ENST00000619438 COPG1Q9Y678 874 aaKnown RBP21.08■□□□□ 0.96
SGMS1-210ENST00000619438 SPTY2D1-AS1A0A0U1RR47 76 aa21.07■□□□□ 0.96
SGMS1-210ENST00000619438 UBA6A0AVT1 1052 aaPredicted RBP21.07■□□□□ 0.96
SGMS1-210ENST00000619438 SDC3O75056 442 aa21.07■□□□□ 0.96
SGMS1-210ENST00000619438 PRSS56P0CW18 603 aa21.07■□□□□ 0.96
SGMS1-210ENST00000619438 EPHA8P29322 1005 aaPredicted RBP21.07■□□□□ 0.96
SGMS1-210ENST00000619438 VIPR1P32241 457 aa21.07■□□□□ 0.96
SGMS1-210ENST00000619438 IGFALSP35858 605 aa21.07■□□□□ 0.96
SGMS1-210ENST00000619438 PFN3P60673 137 aa21.07■□□□□ 0.96
SGMS1-210ENST00000619438 YPEL5P62699 121 aa21.07■□□□□ 0.96
SGMS1-210ENST00000619438 AP2B1P63010 937 aa21.07■□□□□ 0.96
SGMS1-210ENST00000619438 TBL3Q12788 808 aaKnown RBP21.07■□□□□ 0.96
SGMS1-210ENST00000619438 RALGDSQ12967 914 aa21.07■□□□□ 0.96
SGMS1-210ENST00000619438 INPP5AQ14642 412 aa21.07■□□□□ 0.96
SGMS1-210ENST00000619438 IRF4Q15306 451 aa21.07■□□□□ 0.96
SGMS1-210ENST00000619438 PIH1D2Q8WWB5 315 aa21.07■□□□□ 0.96
SGMS1-210ENST00000619438 CATSPER2Q96P56 530 aa21.07■□□□□ 0.96
SGMS1-210ENST00000619438 H3BMM5 538 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 UBFD1O14562 309 aaKnown RBP21.06■□□□□ 0.96
SGMS1-210ENST00000619438 CBFA2T3O75081 653 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 PCCBP05166 539 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 PKMP14618 531 aaKnown RBP21.06■□□□□ 0.96
SGMS1-210ENST00000619438 FMO4P31512 558 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 MC4RP32245 332 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 PEX6Q13608 980 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 TAF11Q15544 211 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 TMEM198Q66K66 360 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 LRRC74BQ6ZQY2 392 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 SPNS2Q8IVW8 549 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 EID2Q8N6I1 236 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 PPP1R36Q96LQ0 422 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 TNFRSF12AQ9NP84 129 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 IL17CQ9P0M4 197 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 FKBPLQ9UIM3 349 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 TMCO1Q9UM00 188 aa21.06■□□□□ 0.96
SGMS1-210ENST00000619438 TOR1BO14657 336 aa21.05■□□□□ 0.96
SGMS1-210ENST00000619438 SUPT7LO94864 414 aa21.05■□□□□ 0.96
SGMS1-210ENST00000619438 ALPIP09923 528 aa21.05■□□□□ 0.96
SGMS1-210ENST00000619438 ATP4BP51164 291 aa21.05■□□□□ 0.96
SGMS1-210ENST00000619438 FZD2Q14332 565 aa21.05■□□□□ 0.96
SGMS1-210ENST00000619438 AGERQ15109 404 aa21.05■□□□□ 0.96
SGMS1-210ENST00000619438 PAQR3Q6TCH7 311 aa21.05■□□□□ 0.96
SGMS1-210ENST00000619438 PARGQ86W56 976 aa21.05■□□□□ 0.96
SGMS1-210ENST00000619438 PIANPQ8IYJ0 282 aa21.05■□□□□ 0.96
SGMS1-210ENST00000619438 PTGR2Q8N8N7 351 aaPredicted RBP21.05■□□□□ 0.96
SGMS1-210ENST00000619438 NAF1Q96HR8 494 aaKnown RBP21.05■□□□□ 0.96
SGMS1-210ENST00000619438 PPIL1Q9Y3C6 166 aa21.05■□□□□ 0.96
SGMS1-210ENST00000619438 ZNF711Q9Y462 761 aa21.05■□□□□ 0.96
SGMS1-210ENST00000619438 NPIPB15A6NHN6 443 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms