RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 TSGA13Q96PP4 275 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 PTGDR2Q9Y5Y4 395 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 CCDC162PA2VCL2 907 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 TMX2-CTNND1H3BSU7 103 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 BTN3A1O00481 513 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 ASNA1O43681 348 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 NDUFS2O75306 463 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 CDK14O94921 469 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 KLKB1P03952 638 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 RHOCP08134 193 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 ALDOCP09972 364 aaKnown RBP6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 MSH3P20585 1137 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 CD247P20963 164 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 FUT4P22083 530 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 S100A5P33763 92 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 RXRGP48443 463 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 GSTM4Q03013 218 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 SHHQ15465 462 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 CYBRD1Q53TN4 286 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 ELMSAN1Q6PJG2 1045 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 PIM3Q86V86 326 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 ARHGAP12Q8IWW6 846 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 CPNE9Q8IYJ1 553 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 CARNMT1Q8N4J0 409 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 TMEM151AQ8N4L1 468 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 SVOPQ8N4V2 548 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 OR13F1Q8NGS4 319 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 ADAMTS16Q8TE57 1224 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 SNX19Q92543 992 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 PLD4Q96BZ4 506 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 TRMT2BQ96GJ1 504 aaKnown RBP6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 LRCH3Q96II8 777 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 CNDP2Q96KP4 475 aaKnown RBP6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 SH3GL1Q99961 368 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 RBM4BQ9BQ04 359 aaKnown RBP6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 RBM4Q9BWF3 364 aaKnown RBP6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 MUC3BQ9H195 1237 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 NOL6Q9H6R4 1146 aaKnown RBP6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 ST14Q9Y5Y6 855 aa6.86□□□□□ -1.31
SRGAP3-213ENST00000618999 TRAV19A0A0A6YYK7 116 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 MYO1GB0I1T2 1018 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 J3KR12 359 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 RASGRP1O95267 797 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 MATN4O95460 622 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 F11P03951 625 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 MATN1P21941 496 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 LEPRP48357 1165 aaKnown RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 DIO3P55073 304 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 SH3BP2P78314 561 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 ADGRF1Q5T601 910 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 MANEALQ5VSG8 457 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 NADSYN1Q6IA69 706 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 CILP2Q8IUL8 1156 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 FUNDC1Q8IVP5 155 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 CCDC103Q8IW40 242 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 ABHD11Q8NFV4 315 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 OR2T12Q8NG77 320 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 PSMA8Q8TAA3 256 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 HDAC2Q92769 488 aaKnown RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 RMDN1Q96DB5 314 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 L3HYPDHQ96EM0 354 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 C3orf30Q96M34 536 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 KCNA7Q96RP8 456 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 LHPPQ9H008 270 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC25A51Q9H1U9 297 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 HCFC1R1Q9NWW0 138 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 USE1Q9NZ43 259 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 CFAP97Q9P2B7 532 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 TRMT6Q9UJA5 497 aaKnown RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 AGO1Q9UL18 857 aaKnown RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 TSC2P49815 1807 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 KRBA1A5PL33 1030 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 MEN1O00255 615 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 B4GAT1O43505 415 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 VPS26AO75436 327 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 EPCAMP16422 314 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 CES1P23141 567 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 GSTM2P28161 218 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC6A4P31645 630 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 ACVRL1P37023 503 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 OPRL1P41146 370 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 ARCN1P48444 511 aaKnown RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 GRSF1Q12849 480 aaKnown RBP eCLIP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 GTF2H3Q13889 308 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 RFX4Q33E94 735 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 FBXO48Q5FWF7 155 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 TPGS1Q6ZTW0 290 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 GPRIN3Q6ZVF9 776 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 GAREM2Q75VX8 874 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 NANOGNBQ7Z5D8 188 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 HID1Q8IV36 788 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 GPR65Q8IYL9 337 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 CDYL2Q8N8U2 506 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 OR7D4Q8NG98 312 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 METTL6Q8TCB7 284 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 ANKRD49Q8WVL7 239 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 AURKBQ96GD4 344 aaPredicted RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 HEPHQ9BQS7 1158 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 SMG9Q9H0W8 520 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms