RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 DUX4L4P0CJ87 422 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 HADHAP40939 763 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 GPR143P51810 404 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 NIPAL4Q0D2K0 466 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 SPECC1Q5M775 1068 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 FIP1L1Q6UN15 594 aaKnown RBP2.37□□□□□ -2.03
TARDBP-220ENST00000618606 GLDNQ6ZMI3 551 aaPredicted RBP2.37□□□□□ -2.03
TARDBP-220ENST00000618606 Q6ZRP5 223 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 LACC1Q8IV20 430 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 DIS3L2Q8IYB7 885 aaKnown RBP2.37□□□□□ -2.03
TARDBP-220ENST00000618606 RAB42Q8N4Z0 105 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 METTL6Q8TCB7 284 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 DAZLQ92904 295 aaKnown RBP2.37□□□□□ -2.03
TARDBP-220ENST00000618606 AZIN2Q96A70 460 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 PERPQ96FX8 193 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 NSL1Q96IY1 281 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 USP28Q96RU2 1077 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 MXD3Q9BW11 206 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 KAT14Q9H8E8 782 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 PANK3Q9H999 370 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 SEPT11Q9NVA2 429 aaKnown RBP2.37□□□□□ -2.03
TARDBP-220ENST00000618606 NUDT4Q9NZJ9 180 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 PRO0461Q9UI25 63 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 VPS28Q9UK41 221 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 PCDHGB4Q9UN71 923 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 WDR37Q9Y2I8 494 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 TDRD9Q8NDG6 1382 aaKnown RBP2.36□□□□□ -2.03
TARDBP-220ENST00000618606 LOC101059948A0A1B0GTJ6 334 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 A0A1W2PRB8 838 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 hCG_1807616A0A1W2PRN6 198 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 MED19A0JLT2 244 aaPredicted RBP2.36□□□□□ -2.03
TARDBP-220ENST00000618606 ELOVL7A1L3X0 281 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 TSPY2A6NKD2 308 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 E9PI62 339 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 H3BQ06 376 aaPredicted RBP2.36□□□□□ -2.03
TARDBP-220ENST00000618606 AP3D1O14617 1153 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 PLOD3O60568 738 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 IGKV3-15P01624 115 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 DNTTP04053 509 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 CLEC3BP05452 202 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 TSPY3P0CV98 308 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 TSPY8P0CW00 308 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 ACADMP11310 421 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 GLULP15104 373 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 PORP16435 677 aaPredicted RBP2.36□□□□□ -2.03
TARDBP-220ENST00000618606 CA6P23280 308 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 CHMP24386 653 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 PBX3P40426 434 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 PIK3CAP42336 1068 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 PSMC4P43686 418 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 ARF3P61204 181 aaPredicted RBP2.36□□□□□ -2.03
TARDBP-220ENST00000618606 RPS3AP61247 264 aaKnown RBP2.36□□□□□ -2.03
TARDBP-220ENST00000618606 ARF1P84077 181 aaKnown RBP2.36□□□□□ -2.03
TARDBP-220ENST00000618606 TSPY1Q01534 308 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 PRKCZQ05513 592 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 PAX8Q06710 450 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 LY6DQ14210 128 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 BECN1Q14457 450 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 MED22Q15528 200 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 ALDH1L2Q3SY69 923 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 GCNT6Q5T4J0 391 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 CFAP58Q5T655 872 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 MFSD4BQ5TF39 518 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 CYP20A1Q6UW02 462 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 TMCO3Q6UWJ1 677 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 BRINP3Q76B58 766 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 PTAR1Q7Z6K3 402 aaPredicted RBP2.36□□□□□ -2.03
TARDBP-220ENST00000618606 HOGA1Q86XE5 327 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 ARHGAP12Q8IWW6 846 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 CPSF7Q8N684 471 aaKnown RBP2.36□□□□□ -2.03
TARDBP-220ENST00000618606 HJURPQ8NCD3 748 aaPredicted RBP2.36□□□□□ -2.03
TARDBP-220ENST00000618606 TIGD1Q96MW7 591 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 ZNF582Q96NG8 517 aaPredicted RBP2.36□□□□□ -2.03
TARDBP-220ENST00000618606 DACH2Q96NX9 599 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 WDFY2Q96P53 400 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 AP1M1Q9BXS5 423 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 NSMCE4AQ9NXX6 385 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 GPR83Q9NYM4 423 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 NKIRAS2Q9NYR9 191 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 NPAP1Q9NZP6 1156 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 THEGQ9P2T0 379 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 TTLL3Q9Y4R7 772 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 RIPK3Q9Y572 518 aa2.36□□□□□ -2.03
TARDBP-220ENST00000618606 COL16A1Q07092 1604 aaPredicted RBP2.35□□□□□ -2.03
TARDBP-220ENST00000618606 A0A1W2PRQ8 180 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 AGAP14A8MT82 685 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 MPTX1A8MV57 137 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 B4DLN1 442 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 SCAMP1O15126 338 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 OGG1O15527 345 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 IDH3BO43837 385 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 STARD3NLO95772 234 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 SCGB1D1O95968 90 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 ALOX12P18054 663 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 ITIH1P19827 911 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 CA4P22748 312 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 ACSL1P33121 698 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 CLNS1AP54105 237 aaKnown RBP2.35□□□□□ -2.03
TARDBP-220ENST00000618606 GALCP54803 685 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 NAP1L1P55209 391 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms