RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 AKAP9Q99996 3911 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 IGHV5-51A0A0C4DH38 117 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 GRID2O43424 1007 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 ANXA9O76027 345 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 PDHA1P08559 390 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 MLNP12872 115 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 PPP1CAP62136 330 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 SLC29A2Q14542 456 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 KCNJ11Q14654 390 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 CCDC38Q502W7 563 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 TEX44Q53QW1 395 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 PRUNE1Q86TP1 453 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 LINC00523Q86TU6 105 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 ZBED8Q8IZ13 594 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 ARFGAP2Q8N6H7 521 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 SLC41A2Q96JW4 573 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 NAT9Q9BTE0 207 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 TMEM109Q9BVC6 243 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 ILKAPQ9H0C8 392 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 CHST8Q9H2A9 424 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 VPS37BQ9H9H4 285 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 ETNK1Q9HBU6 452 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 WASH6PQ9NQA3 447 aa17.15■□□□□ 0.34
TRAPPC3-209ENST00000616395 JCHAINP01591 159 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 EBLN1P0CF75 366 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 STC1P52823 247 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 IFI35P80217 286 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 NIPAL4Q0D2K0 466 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 BBS9Q3SYG4 887 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 TUBB8Q3ZCM7 444 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 VWA5B1Q5TIE3 1220 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 ZNF517Q6ZMY9 492 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 MED25Q71SY5 747 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 RIBC1Q8N443 379 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 TMEM102Q8N9M5 508 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 ST6GALNAC3Q8NDV1 305 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 INPP5DQ92835 1189 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 SH3GL2Q99962 352 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 POLR1EQ9GZS1 481 aaKnown RBP17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 CENPHQ9H3R5 247 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 FGF21Q9NSA1 209 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 KLC4Q9NSK0 619 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 C5AR2Q9P296 337 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 EPHA6Q9UF33 1036 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 SNX7Q9UNH6 387 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 OSGIN2Q9Y236 505 aa17.14■□□□□ 0.33
TRAPPC3-209ENST00000616395 HEATR9A2RTY3 570 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 FADS2P1A8MWK0 482 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 GOLGA8MH3BSY2 632 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 RASGRF2O14827 1237 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 NUAK1O60285 661 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 CPNE3O75131 537 aaKnown RBP17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 ACSL3O95573 720 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 PTPN3P26045 913 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 CLCNKAP51800 687 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 CBLBQ13191 982 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 UAP1Q16222 522 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 KYNUQ16719 465 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 KLHL38Q2WGJ6 581 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 AGBL2Q5U5Z8 902 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 LCN10Q6JVE6 187 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 CERS6Q6ZMG9 384 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 BPHLQ86WA6 291 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 ZNF567Q8N184 647 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 TAB3Q8N5C8 712 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 ZBTB2Q8N680 514 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 CNTD1Q8N815 330 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 ENDOVQ8N8Q3 282 aaKnown RBP17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 SLC38A9Q8NBW4 561 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 ZNF514Q96K75 400 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 LURAP1Q96LR2 239 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 MLPHQ9BV36 600 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 GBA3Q9H227 469 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 NINJ2Q9NZG7 142 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 SEMA5BQ9P283 1151 aa17.13■□□□□ 0.33
TRAPPC3-209ENST00000616395 E7ESA3 106 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 RGS16O15492 202 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 SCRG1O75711 98 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 ZNF30P17039 623 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 ZNF8P17098 575 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 GLRBP48167 497 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 GEMP55040 296 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 RRADP55042 308 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 ACY1Q03154 408 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 GPR18Q14330 331 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 SEPT7Q16181 437 aaKnown RBP17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 LYPLAL1Q5VWZ2 237 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 TAOK1Q7L7X3 1001 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 ARRDC2Q8TBH0 407 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 TEKT5Q96M29 485 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 SERPINB12Q96P63 405 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 RAB33BQ9H082 229 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 LRRC40Q9H9A6 602 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 SLC40A1Q9NP59 571 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 POT1Q9NUX5 634 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 ATXN10Q9UBB4 475 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 SLC23A2Q9UGH3 650 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 TCFL5Q9UL49 500 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 IKBKGQ9Y6K9 419 aa17.12■□□□□ 0.33
TRAPPC3-209ENST00000616395 PCSK5Q92824 1860 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms