RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 E7ENX8 843 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 ENPP3O14638 875 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 DNAJA2O60884 412 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 AHSA1O95433 338 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 TAP2Q03519 686 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 RHEBQ15382 184 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 LCTLQ6UWM7 567 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 FAM92BQ6ZTR7 304 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 ZBTB2Q8N680 514 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 CCDC107Q8WV48 283 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 APOLD1Q96LR9 279 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 DNAJB11Q9UBS4 358 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 LOC100509620A0A075B734 347 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 HSBP1L1C9JCN9 74 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 COQ9O75208 318 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 PAHP00439 452 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 TAF10Q12962 218 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 MFSD2AQ8NA29 543 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 CLEC1AQ8NC01 280 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 DQX1Q8TE96 717 aaKnown RBP12.43□□□□□ -0.42
TCF4-248ENST00000616053 THOC3Q96J01 351 aaKnown RBP12.43□□□□□ -0.42
TCF4-248ENST00000616053 TMEM100Q9NV29 134 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 HES2Q9Y543 173 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 INHAP05111 366 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 FGF1P05230 155 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 TYRP1P17643 537 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 CDK9P50750 372 aaKnown RBP12.43□□□□□ -0.42
TCF4-248ENST00000616053 MAZP56270 477 aaKnown RBP12.43□□□□□ -0.42
TCF4-248ENST00000616053 FKBP1BP68106 108 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 ZNF283Q8N7M2 679 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 ATAD1Q8NBU5 361 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 OR10T2Q8NGX3 314 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 GDPD5Q8WTR4 605 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 RCN3Q96D15 328 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 NUS1Q96E22 293 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 CDT1Q9H211 546 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 CYP8B1Q9UNU6 501 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 SLC34A2O95436 690 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 NPR2P20594 1047 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 THBS2P35442 1172 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 NCBP2P52298 156 aaKnown RBP eCLIP12.42□□□□□ -0.42
TCF4-248ENST00000616053 PKP1Q13835 747 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 NRF1Q16656 503 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 CDONQ4KMG0 1287 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 PPP1R35Q8TAP8 253 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 SLC35G5Q96KT7 338 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 ZNF180Q9UJW8 692 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 ABCC2Q92887 1545 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 PCP4L1A6NKN8 68 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 DCXO43602 365 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 ELOCQ15369 112 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 ZNF423Q2M1K9 1284 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 MMAAQ8IVH4 418 aaKnown RBP12.42□□□□□ -0.42
TCF4-248ENST00000616053 PCDH20Q8N6Y1 951 aaKnown RBP12.42□□□□□ -0.42
TCF4-248ENST00000616053 ZNF454Q8N9F8 522 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 BPIFA2Q96DR5 249 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 RBP7Q96R05 134 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 CYTH4Q9UIA0 394 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 ZNF608Q9ULD9 1512 aaPredicted RBP12.42□□□□□ -0.42
TCF4-248ENST00000616053 PNPLA7Q6ZV29 1317 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 GBX2P52951 348 aaPredicted RBP12.42□□□□□ -0.42
TCF4-248ENST00000616053 PRMT2P55345 433 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 MADCAM1Q13477 382 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 GPR68Q15743 365 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 RUNDC3AQ59EK9 446 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 MOXD1Q6UVY6 613 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 MED28Q9H204 178 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 SEMA6CQ9H3T2 930 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 INSL6Q9Y581 213 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 MYH8P13535 1937 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 PLXNC1O60486 1568 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 KDM5CP41229 1560 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 SOX1O00570 391 aaPredicted RBP12.42□□□□□ -0.42
TCF4-248ENST00000616053 IFNA10P01566 189 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 CARD17Q5XLA6 110 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 ZNF782Q6ZMW2 699 aaPredicted RBP12.42□□□□□ -0.42
TCF4-248ENST00000616053 SLC24A5Q71RS6 500 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 SPATC1Q76KD6 591 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 MON1AQ86VX9 555 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 YIPF7Q8N8F6 280 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 OR56B2PQ8NGI1 322 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 SNIP1Q8TAD8 396 aaKnown RBP12.42□□□□□ -0.42
TCF4-248ENST00000616053 BPIFB1Q8TDL5 484 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 CASD1Q96PB1 797 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 TSSK3Q96PN8 268 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 CHIAQ9BZP6 476 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 ARHGAP31Q2M1Z3 1444 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 SYNMO15061 1565 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 ANXA4P09525 319 aaPredicted RBP12.42□□□□□ -0.42
TCF4-248ENST00000616053 TTLQ8NG68 377 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 THAP3Q8WTV1 239 aaPredicted RBP12.42□□□□□ -0.42
TCF4-248ENST00000616053 JPH3Q8WXH2 748 aaPredicted RBP12.42□□□□□ -0.42
TCF4-248ENST00000616053 NAA11Q9BSU3 229 aaPredicted RBP12.42□□□□□ -0.42
TCF4-248ENST00000616053 SLC29A3Q9BZD2 475 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 GSKIPQ9P0R6 139 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 A0A087WXM4 84 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 NPEPPSL1A6NEC2 478 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 RPP14O95059 124 aaKnown RBP12.42□□□□□ -0.42
TCF4-248ENST00000616053 ABCG1P45844 678 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 RPL14P50914 215 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms