RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 SCNN1AP37088 669 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 ZNF404Q494X3 552 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 PRSS36Q5K4E3 855 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 VARS2Q5ST30 1063 aaKnown RBP12.91□□□□□ -0.34
MSH6-214ENST00000616033 SIGIRRQ6IA17 410 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 ZDHHC21Q8IVQ6 265 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 NLGN4XQ8N0W4 816 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 ELMOD1Q8N336 334 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 METTL4Q8N3J2 472 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 OR56A4Q8NGH8 313 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 OR52J3Q8NH60 311 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 DYNC2LI1Q8TCX1 351 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 UTP15Q8TED0 518 aaKnown RBP12.91□□□□□ -0.34
MSH6-214ENST00000616033 PTCD2Q8WV60 388 aaKnown RBP12.91□□□□□ -0.34
MSH6-214ENST00000616033 TSSK3Q96PN8 268 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 OR52E6Q96RD3 313 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 SLC52A3Q9NQ40 469 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 TAS2R16Q9NYV7 291 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 ZNF221Q9UK13 617 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 NBNO60934 754 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 TULP3O75386 442 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 ITIH1P19827 911 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 LIPAP38571 399 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 HSPA7P48741 367 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 ANGPTL8Q6UXH0 198 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 SPATA19Q7Z5L4 167 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 HORMAD1Q86X24 394 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 TCAIMQ8N3R3 496 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 TTC29Q8NA56 475 aaPredicted RBP12.91□□□□□ -0.34
MSH6-214ENST00000616033 KCNC2Q96PR1 638 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 TMEM246Q9BRR3 403 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 EMILIN2Q9BXX0 1053 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 OR51E2Q9H255 320 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 PAQR5Q9NXK6 330 aaPredicted RBP12.91□□□□□ -0.34
MSH6-214ENST00000616033 USE1Q9NZ43 259 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 ABCG2Q9UNQ0 655 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 GPR182O15218 404 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 TREHO43280 583 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 FGF4P08620 206 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 UROSP10746 265 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 POU2F1P14859 743 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 EIF2DP41214 584 aaKnown RBP12.91□□□□□ -0.34
MSH6-214ENST00000616033 POLD2P49005 469 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 ARHGDIAP52565 204 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 OR2B6P58173 313 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 PPP2R2BQ00005 443 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 ZNF235Q14590 738 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 MARCH8Q5T0T0 291 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 UBASH3BQ8TF42 649 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 ZNF599Q96NL3 588 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 PSD2Q9BQI7 771 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 SLIRPQ9GZT3 109 aaKnown RBP12.91□□□□□ -0.34
MSH6-214ENST00000616033 FAM8A1Q9UBU6 413 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 MYLKQ15746 1914 aa12.91□□□□□ -0.34
MSH6-214ENST00000616033 DYRK3O43781 588 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 CREG1O75629 220 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 UBL4AP11441 157 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 COL6A1P12109 1028 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 AKT1P31749 480 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 ZFP36L2P47974 494 aaKnown RBP12.9□□□□□ -0.34
MSH6-214ENST00000616033 RENBPP51606 427 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 GALNT1Q10472 559 aaPredicted RBP12.9□□□□□ -0.34
MSH6-214ENST00000616033 EFEMP1Q12805 493 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 DMC1Q14565 340 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 CARD16Q5EG05 197 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 ZNF691Q5VV52 312 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 NXNL2Q5VZ03 156 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 ZFAND4Q86XD8 727 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 C3orf58Q8NDZ4 430 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 SLC13A3Q8WWT9 602 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 REXO5Q96IC2 774 aaKnown RBP12.9□□□□□ -0.34
MSH6-214ENST00000616033 SLC25A51Q9H1U9 297 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 QPCTLQ9NXS2 382 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 TRMT6Q9UJA5 497 aaKnown RBP12.9□□□□□ -0.34
MSH6-214ENST00000616033 SAMHD1Q9Y3Z3 626 aaKnown RBP12.9□□□□□ -0.34
MSH6-214ENST00000616033 PER2O15055 1255 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 DNAJB2P25686 324 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 ACVRL1P37023 503 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 ZFP69Q49AA0 526 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 LIX1Q8N485 282 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 OR4F6Q8NGB9 312 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 SKA2Q8WVK7 121 aaPredicted RBP12.9□□□□□ -0.34
MSH6-214ENST00000616033 FUBP1Q96AE4 644 aaKnown RBP12.9□□□□□ -0.34
MSH6-214ENST00000616033 MAP6Q96JE9 813 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 NEDD4LQ96PU5 975 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 VPS35Q96QK1 796 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 TSEN34Q9BSV6 310 aaKnown RBP12.9□□□□□ -0.34
MSH6-214ENST00000616033 TMLHEQ9NVH6 421 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 SMPD4Q9NXE4 827 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 MAT2BQ9NZL9 334 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 HS3ST4Q9Y661 456 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 MYO10Q9HD67 2058 aa12.9□□□□□ -0.34
MSH6-214ENST00000616033 PNMA8CA0A1B0GUJ8 204 aa12.9□□□□□ -0.35
MSH6-214ENST00000616033 TYW5A2RUC4 315 aaKnown RBP12.9□□□□□ -0.35
MSH6-214ENST00000616033 TRIM64BA6NI03 449 aa12.9□□□□□ -0.35
MSH6-214ENST00000616033 CTDSP2O14595 271 aa12.9□□□□□ -0.35
MSH6-214ENST00000616033 SLC7A4O43246 635 aa12.9□□□□□ -0.35
MSH6-214ENST00000616033 LDB2O43679 373 aa12.9□□□□□ -0.35
MSH6-214ENST00000616033 FDXRP22570 491 aa12.9□□□□□ -0.35
MSH6-214ENST00000616033 CXCR2P25025 360 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms