RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 RFPL1O75677 317 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 RPN2P04844 631 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 CHRM5P08912 532 aaPredicted RBP21.99■■□□□ 1.11
FAM228B-208ENST00000613899 PVRP15151 417 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 UGT2B7P16662 529 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 ITGA1P56199 1179 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 CCZ1BP86790 482 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 CCZ1P86791 482 aaPredicted RBP21.99■■□□□ 1.11
FAM228B-208ENST00000613899 SEMA3AQ14563 771 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 UGT8Q16880 541 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 MPP5Q8N3R9 675 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 C19orf47Q8N9M1 422 aaKnown RBP21.99■■□□□ 1.11
FAM228B-208ENST00000613899 SLC38A9Q8NBW4 561 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 ASZ1Q8WWH4 475 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 THAP4Q8WY91 577 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 N4BP2L2Q92802 583 aaPredicted RBP21.99■■□□□ 1.11
FAM228B-208ENST00000613899 CARD6Q9BX69 1037 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 SLC7A5P2Q9GIP4 190 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 KLHL25Q9H0H3 589 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 ACTR5Q9H9F9 607 aaPredicted RBP21.99■■□□□ 1.11
FAM228B-208ENST00000613899 CHRAC1Q9NRG0 131 aa21.99■■□□□ 1.11
FAM228B-208ENST00000613899 FARSAQ9Y285 508 aaKnown RBP21.99■■□□□ 1.11
FAM228B-208ENST00000613899 MYO18BQ8IUG5 2567 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 E7EQ34 232 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 PRMT5O14744 637 aaPredicted RBP21.98■■□□□ 1.11
FAM228B-208ENST00000613899 APOA4P06727 396 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 CCR7P32248 378 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 RORAP35398 523 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 NPY2RP49146 381 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 CSE1LP55060 971 aaKnown RBP21.98■■□□□ 1.11
FAM228B-208ENST00000613899 RPS18P62269 152 aaKnown RBP21.98■■□□□ 1.11
FAM228B-208ENST00000613899 CDK16Q00536 496 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 HSPA14Q0VDF9 509 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 TMED2Q15363 201 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 ZNF789Q5FWF6 425 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 PLEKHS1Q5SXH7 462 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 PRAMEF17Q5VTA0 474 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 CDHR3Q6ZTQ4 885 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 TMEM135Q86UB9 458 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 APLFQ8IW19 511 aaPredicted RBP21.98■■□□□ 1.11
FAM228B-208ENST00000613899 TCTN2Q96GX1 697 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 OR2A14Q96R47 310 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 AP1M1Q9BXS5 423 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 CHST8Q9H2A9 424 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 TREX1Q9NSU2 369 aa21.98■■□□□ 1.11
FAM228B-208ENST00000613899 A0A0J9YY10 115 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 CD3EAPO15446 510 aaKnown RBP21.97■■□□□ 1.11
FAM228B-208ENST00000613899 HBQ1P09105 142 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 RAB40ALP0C0E4 278 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 TPSB2P20231 275 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 KCNJ1P48048 391 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 CRADDP78560 199 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 KIR2DS3Q14952 304 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 TPSAB1Q15661 275 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 SYTL1Q8IYJ3 562 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 GPR135Q8IZ08 494 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 PANX3Q96QZ0 392 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 DPH2Q9BQC3 489 aaPredicted RBP21.97■■□□□ 1.11
FAM228B-208ENST00000613899 CHRNA10Q9GZZ6 450 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 MRM3Q9HC36 420 aaKnown RBP21.97■■□□□ 1.11
FAM228B-208ENST00000613899 PCMTD2Q9NV79 361 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 MARCH4Q9P2E8 410 aaPredicted RBP21.97■■□□□ 1.11
FAM228B-208ENST00000613899 GNPTGQ9UJJ9 305 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 TP53TG5Q9Y2B4 290 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 PPP2R2CQ9Y2T4 447 aa21.97■■□□□ 1.11
FAM228B-208ENST00000613899 GPC4O75487 556 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 CXCR5P32302 372 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 CASRP41180 1078 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 RAB28P51157 221 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 TLE1Q04724 770 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 SLC5A12Q1EHB4 618 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 PTRHD1Q6GMV3 140 aaKnown RBP21.96■■□□□ 1.11
FAM228B-208ENST00000613899 TCTN3Q6NUS6 607 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 UNC5DQ6UXZ4 953 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 LDB1Q86U70 411 aaPredicted RBP21.96■■□□□ 1.11
FAM228B-208ENST00000613899 TRIM73Q86UV7 250 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 LRRC6Q86X45 466 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 DCUN1D3Q8IWE4 304 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 LKAAEAR1Q8TD35 194 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 NLNQ9BYT8 704 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 SPHK1Q9NYA1 384 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 PLAGL1Q9UM63 463 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 SNX7Q9UNH6 387 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 CDYLQ9Y232 598 aa21.96■■□□□ 1.11
FAM228B-208ENST00000613899 ASH1LQ9NR48 2969 aaKnown RBP21.96■■□□□ 1.11
FAM228B-208ENST00000613899 SNRNP200O75643 2136 aaKnown RBP21.95■■□□□ 1.11
FAM228B-208ENST00000613899 IQCF5A8MTL0 148 aa21.95■■□□□ 1.1
FAM228B-208ENST00000613899 TPBGLP0DKB5 382 aa21.95■■□□□ 1.1
FAM228B-208ENST00000613899 PKLRP30613 574 aa21.95■■□□□ 1.1
FAM228B-208ENST00000613899 IL10RAQ13651 578 aa21.95■■□□□ 1.1
FAM228B-208ENST00000613899 LRRC8BQ6P9F7 803 aa21.95■■□□□ 1.1
FAM228B-208ENST00000613899 VRK3Q8IV63 474 aa21.95■■□□□ 1.1
FAM228B-208ENST00000613899 ENDOVQ8N8Q3 282 aaKnown RBP21.95■■□□□ 1.1
FAM228B-208ENST00000613899 FLVCR1-AS1Q8TAF5 88 aa21.95■■□□□ 1.1
FAM228B-208ENST00000613899 GSDMBQ8TAX9 411 aa21.95■■□□□ 1.1
FAM228B-208ENST00000613899 EPN3Q9H201 632 aa21.95■■□□□ 1.1
FAM228B-208ENST00000613899 SEC16AO15027 2179 aa21.94■■□□□ 1.1
FAM228B-208ENST00000613899 ISM1B1AKI9 464 aa21.94■■□□□ 1.1
FAM228B-208ENST00000613899 KPNA5O15131 536 aa21.94■■□□□ 1.1
FAM228B-208ENST00000613899 ZNF749O43361 778 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms