RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 OGNP20774 298 aaKnown RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 HOXD9P28356 352 aaPredicted RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 NUDT6P53370 316 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 CTF1Q16619 201 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 INAVAQ3KP66 663 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 CARD16Q5EG05 197 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 NIPAL1Q6NVV3 410 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 MICU2Q8IYU8 434 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 TEX26Q8N6G2 289 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 PAPD5Q8NDF8 572 aaKnown RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 ZNF548Q8NEK5 533 aaPredicted RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 ISG20Q96AZ6 181 aaKnown RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 PARK7Q99497 189 aaKnown RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 ATP13A3Q9H7F0 1226 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 DLGAP4Q9Y2H0 992 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 CAB39Q9Y376 341 aaPredicted RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 TRIM64A6NGJ6 449 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 CPSF4O95639 269 aaKnown RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 DBTP11182 482 aaKnown RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 CDK5R2Q13319 367 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 FAM110CQ1W6H9 321 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 ZCCHC8Q6NZY4 707 aaKnown RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 DOK6Q6PKX4 331 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 PARVBQ9HBI1 364 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 SCML2Q9UQR0 700 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 EIF3LQ9Y262 564 aaKnown RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 ZSWIM8A7E2V4 1837 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 ANKRD66B4E2M5 251 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 KPNA4O00629 521 aaPredicted RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 TBX1O43435 398 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 RECQL5O94762 991 aaPredicted RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 MT-ND2P03891 347 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 HSMCR30P0CW71 290 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 SUOXP51687 545 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 ISL1P61371 349 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 TP53BP2Q13625 1128 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 TYSND1Q2T9J0 566 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 RNF219Q5W0B1 726 aaPredicted RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 DCP2Q8IU60 420 aaKnown RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 HMG20AQ9NP66 347 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 GPRC5BQ9NZH0 403 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 KIF17Q9P2E2 1029 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 SEPT3Q9UH03 358 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 SLCO3A1Q9UIG8 710 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 C3orf18Q9UK00 162 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 ZNF232Q9UNY5 417 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 A0A0U1RQF3 1178 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 TYW5A2RUC4 315 aaKnown RBP19.98■□□□□ 0.79
SSBP3-216ENST00000610401 M0QZQ0 153 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 FAM20BO75063 409 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 RHOCP08134 193 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 GSTT2P0CG29 244 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 GSTT2BP0CG30 244 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 COL6A1P12109 1028 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 TNFRSF1BP20333 461 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 PARP15Q460N3 678 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 RSPO2Q6UXX9 243 aaPredicted RBP19.98■□□□□ 0.79
SSBP3-216ENST00000610401 PLD3Q8IV08 490 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 ZDHHC21Q8IVQ6 265 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 OR52J3Q8NH60 311 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 GPR62Q9BZJ7 368 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 FBXO44Q9H4M3 255 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 PCDHB5Q9Y5E4 795 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 TULP3O75386 442 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 GTF2E2P29084 291 aaKnown RBP19.98■□□□□ 0.79
SSBP3-216ENST00000610401 PHC1P78364 1004 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 TAF1CQ15572 869 aaPredicted RBP19.98■□□□□ 0.79
SSBP3-216ENST00000610401 COLEC12Q5KU26 742 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 GPR153Q6NV75 609 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 TMEM53Q6P2H8 277 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 TERB1Q8NA31 727 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 DACH2Q96NX9 599 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 RBM4BQ9BQ04 359 aaKnown RBP19.98■□□□□ 0.79
SSBP3-216ENST00000610401 RBM4Q9BWF3 364 aaKnown RBP19.98■□□□□ 0.79
SSBP3-216ENST00000610401 GMPPBQ9Y5P6 360 aa19.98■□□□□ 0.79
SSBP3-216ENST00000610401 SEC24AO95486 1093 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 PPP2R2BQ00005 443 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 EPS8Q12929 822 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 GLB1LQ6UWU2 654 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 RNF19BQ6ZMZ0 732 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 ADGRG2Q8IZP9 1017 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 SCML4Q8N228 414 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 CARNMT1Q8N4J0 409 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 FAR1Q8WVX9 515 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 HDAC2Q92769 488 aaKnown RBP19.97■□□□□ 0.79
SSBP3-216ENST00000610401 EID2BQ96D98 161 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 ZNF347Q96SE7 839 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 ASB8Q9H765 288 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 ZBTB20Q9HC78 741 aaPredicted RBP19.97■□□□□ 0.79
SSBP3-216ENST00000610401 PDP1Q9P0J1 537 aaPredicted RBP19.97■□□□□ 0.79
SSBP3-216ENST00000610401 OPTCQ9UBM4 332 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 MYO1DO94832 1006 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 PGLSO95336 258 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 DLGAP3O95886 979 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 VIPP01282 170 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 TTPAP49638 278 aa19.97■□□□□ 0.79
SSBP3-216ENST00000610401 CLK1P49759 484 aaKnown RBP19.97■□□□□ 0.79
SSBP3-216ENST00000610401 GRSF1Q12849 480 aaKnown RBP eCLIP19.97■□□□□ 0.79
SSBP3-216ENST00000610401 PRSS55Q6UWB4 352 aaPredicted RBP19.97■□□□□ 0.79
SSBP3-216ENST00000610401 SYTL1Q8IYJ3 562 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms