RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 IL22Q9GZX6 179 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 VPS37BQ9H9H4 285 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 PDE7BQ9NP56 450 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 CHRAC1Q9NRG0 131 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 IMP3Q9NV31 184 aaKnown RBP18.69■□□□□ 0.58
SGMS1-208ENST00000608287 BFARQ9NZS9 450 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 CFAP20Q9Y6A4 193 aaKnown RBP18.69■□□□□ 0.58
SGMS1-208ENST00000608287 TCRBV7S3A2A0A539 114 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 PHF2O75151 1096 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 TCP1P17987 556 aaKnown RBP18.68■□□□□ 0.58
SGMS1-208ENST00000608287 NSG1P42857 185 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 CCL11P51671 97 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 PER3P56645 1201 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 ITIH4Q14624 930 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 GSE1Q14687 1217 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 LYPLAL1Q5VWZ2 237 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 LRRC8BQ6P9F7 803 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 BPHLQ86WA6 291 aaPredicted RBP18.68■□□□□ 0.58
SGMS1-208ENST00000608287 IQCKQ8N0W5 287 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 OR4L1Q8NH43 312 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 CT55Q8WUE5 264 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 MARVELD3Q96A59 401 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 INSM2Q96T92 566 aaPredicted RBP18.68■□□□□ 0.58
SGMS1-208ENST00000608287 TTC1Q99614 292 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 OGFRQ9NZT2 677 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 ENTPD4Q9Y227 616 aa18.68■□□□□ 0.58
SGMS1-208ENST00000608287 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.67■□□□□ 0.58
SGMS1-208ENST00000608287 C17orf113A0A1B0GUU1 675 aa18.67■□□□□ 0.58
SGMS1-208ENST00000608287 SPAG6O75602 509 aa18.67■□□□□ 0.58
SGMS1-208ENST00000608287 RASSF9O75901 435 aa18.67■□□□□ 0.58
SGMS1-208ENST00000608287 AP2A2O94973 939 aa18.67■□□□□ 0.58
SGMS1-208ENST00000608287 MTHFD1P11586 935 aaKnown RBP18.67■□□□□ 0.58
SGMS1-208ENST00000608287 MGAT1P26572 445 aa18.67■□□□□ 0.58
SGMS1-208ENST00000608287 PTPN4P29074 926 aa18.67■□□□□ 0.58
SGMS1-208ENST00000608287 SARNPP82979 210 aaKnown RBP18.67■□□□□ 0.58
SGMS1-208ENST00000608287 KCNJ11Q14654 390 aa18.67■□□□□ 0.58
SGMS1-208ENST00000608287 FASTKD1Q53R41 847 aaKnown RBP18.67■□□□□ 0.58
SGMS1-208ENST00000608287 ZNF534Q76KX8 674 aa18.67■□□□□ 0.58
SGMS1-208ENST00000608287 SPDYE1Q8NFV5 336 aaPredicted RBP18.67■□□□□ 0.58
SGMS1-208ENST00000608287 GRK7Q8WTQ7 553 aa18.67■□□□□ 0.58
SGMS1-208ENST00000608287 PEX13Q92968 403 aa18.67■□□□□ 0.58
SGMS1-208ENST00000608287 SYBUQ9NX95 663 aa18.67■□□□□ 0.58
SGMS1-208ENST00000608287 ARGFXA6NJG6 315 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 FNTAP49354 379 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 GFERP55789 205 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 PLCL1Q15111 1095 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 NR6A1Q15406 480 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 SLC6A19Q695T7 634 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 DUS1LQ6P1R4 473 aaKnown RBP18.66■□□□□ 0.58
SGMS1-208ENST00000608287 ZNF449Q6P9G9 518 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 PACS1Q6VY07 963 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 CERS6Q6ZMG9 384 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 PRSS42Q7Z5A4 293 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 RSC1A1Q92681 617 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 RMDN2Q96LZ7 410 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 TGM7Q96PF1 710 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 COG4Q9H9E3 785 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 ANAPC5Q9UJX4 755 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 PRSS21Q9Y6M0 314 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 PRRC2CQ9Y520 2896 aaKnown RBP18.66■□□□□ 0.58
SGMS1-208ENST00000608287 F8P00451 2351 aa18.66■□□□□ 0.58
SGMS1-208ENST00000608287 PIKFYVEQ9Y2I7 2098 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 ANKUB1A6NFN9 424 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 QSOX1O00391 747 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 CEACAM4O75871 244 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 GSTM1P09488 218 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 OR56A5P0C7T3 313 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 NMBRP28336 390 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 PPARGP37231 505 aaPredicted RBP18.65■□□□□ 0.58
SGMS1-208ENST00000608287 MAGEA6P43360 314 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 CAPZBP47756 277 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 SEPHS1P49903 392 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 GSTM4Q03013 218 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 KRT33BQ14525 404 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 PRR30Q53SZ7 412 aaPredicted RBP18.65■□□□□ 0.58
SGMS1-208ENST00000608287 ANKRD22Q5VYY1 191 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 CPZQ66K79 652 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 Q8NA96 180 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 CPT1BQ92523 772 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 ZDHHC12Q96GR4 267 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 CAPZA3Q96KX2 299 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 CATSPERZQ9NTU4 200 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 RARRES3Q9UL19 164 aa18.65■□□□□ 0.58
SGMS1-208ENST00000608287 OR1I1O60431 355 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 KLHL41O60662 606 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 AVILO75366 819 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 TMEM63AO94886 807 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 CBX6O95503 412 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 FTH1P02794 183 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 RRADP55042 308 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 SEMA3AQ14563 771 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 PPP1R7Q15435 360 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 KRTAP21-3Q3LHN1 58 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 AARS2Q5JTZ9 985 aaKnown RBP18.64■□□□□ 0.57
SGMS1-208ENST00000608287 IRGCQ6NXR0 463 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 CES3Q6UWW8 571 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 SGSM3Q96HU1 749 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 ELMO2Q96JJ3 720 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 NAPGQ99747 312 aaPredicted RBP18.64■□□□□ 0.57
SGMS1-208ENST00000608287 KIFC1Q9BW19 673 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms