RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 GABPAQ06546 454 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CYP24A1Q07973 514 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SMARCB1Q12824 385 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 FAPQ12884 760 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SLC13A2Q13183 592 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 BMPR2Q13873 1038 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 NFE2L1Q14494 772 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 POLD3Q15054 466 aaPredicted RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SNRNP35Q16560 246 aaKnown RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 GEN1Q17RS7 908 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 KIZQ2M2Z5 673 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZACNQ401N2 412 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 PRR16Q569H4 304 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 Q5BKY6 102 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ARL13AQ5H913 290 aaPredicted RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 GLRA4Q5JXX5 417 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SPANXN3Q5MJ09 141 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 PRR31Q5SQ13 230 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CATSPEREQ5SY80 951 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 TREML2Q5T2D2 321 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 AGAP9Q5VTM2 703 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 MLIPQ5VWP3 458 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SUSD4Q5VX71 490 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 KDM4DQ6B0I6 523 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 REP15Q6BDI9 236 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 LAIR2Q6ISS4 152 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 DCUN1D2Q6PH85 259 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CYP20A1Q6UW02 462 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 NAPRTQ6XQN6 538 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SCARA5Q6ZMJ2 495 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZNF782Q6ZMW2 699 aaPredicted RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZNF534Q76KX8 674 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CCDC190Q86UF4 302 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 FAM160B2Q86V87 743 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 KIF18BQ86Y91 864 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CCDC103Q8IW40 242 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 C8orf59Q8N0T1 100 aaPredicted RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CADM2Q8N3J6 435 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SVOPLQ8N434 492 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 KLHL36Q8N4N3 616 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 TMEM199Q8N511 208 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 DCLK2Q8N568 766 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 AADATQ8N5Z0 425 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ARFGAP1Q8N6T3 406 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 PAF1Q8N7H5 531 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 AMER2Q8N7J2 671 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 FAM71DQ8N9W8 422 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 FNDC5Q8NAU1 212 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 TMEM35BQ8NCS4 154 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 OR7D4Q8NG98 312 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 MCFD2Q8NI22 146 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 NPLOC4Q8TAT6 608 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 HMGCLL1Q8TB92 370 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SPATA18Q8TC71 538 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SPPL2BQ8TCT7 592 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 STYXQ8WUJ0 223 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 DEPDC1BQ8WUY9 529 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CYGBQ8WWM9 190 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 IPCEF1Q8WWN9 437 aaPredicted RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZNF606Q8WXB4 792 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SLC7A6Q92536 515 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 FCGR1BQ92637 280 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 RORBQ92753 470 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 GTF2H4Q92759 462 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 COPS5Q92905 334 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SNAPC3Q92966 411 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SLC38A4Q969I6 547 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 AP2M1Q96CW1 435 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 DYNLL2Q96FJ2 89 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 PDLIM5Q96HC4 596 aaKnown RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 FBXL20Q96IG2 436 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 RNF157Q96PX1 679 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SIGLEC11Q96RL6 698 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 RIT2Q99578 217 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 NPAS2Q99743 824 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 KCTD14Q9BQ13 255 aaPredicted RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 C11orf70Q9BRQ4 267 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CBWD1Q9BRT8 395 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CENPOQ9BU64 300 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SSBP3Q9BWW4 388 aaPredicted RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 FAM49AQ9H0Q0 323 aaPredicted RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 DEFB129Q9H1M3 183 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 IKZF4Q9H2S9 585 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CPVLQ9H3G5 476 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 NARFLQ9H6Q4 476 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 WDR55Q9H6Y2 383 aaPredicted RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 KAT8Q9H7Z6 458 aaKnown RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 MEAF6Q9HAF1 191 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 C3orf14Q9HBI5 128 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 NMRAL1Q9HBL8 299 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SPC25Q9HBM1 224 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CCNB1IP1Q9NPC3 277 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 TIGARQ9NQ88 270 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 IARS2Q9NSE4 1012 aaKnown RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 C1orf112Q9NSG2 853 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 GIMAP4Q9NUV9 329 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 FAM118AQ9NWS6 357 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 GLTPQ9NZD2 209 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 PTTG3PQ9NZH4 202 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CCDC59Q9P031 241 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms