RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 NLGN4XQ8N0W4 816 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 PGAM4Q8N0Y7 254 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 STX19Q8N4C7 294 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 ZCCHC9Q8N567 271 aaKnown RBP8.71□□□□□ -1.01
COMMD3-215ENST00000602574 C12orf45Q8N5I9 185 aaPredicted RBP8.71□□□□□ -1.01
COMMD3-215ENST00000602574 FAM83FQ8NEG4 500 aaPredicted RBP8.71□□□□□ -1.01
COMMD3-215ENST00000602574 APBB2Q92870 758 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 ZNF778Q96MU6 729 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 SORCS2Q96PQ0 1159 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 ZNF300Q96RE9 604 aaPredicted RBP8.71□□□□□ -1.01
COMMD3-215ENST00000602574 KCNA7Q96RP8 456 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 ERVK-6Q9BXR3 956 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 ASPSCR1Q9BZE9 553 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 NUAK2Q9H093 628 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 MIXL1Q9H2W2 232 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 XPNPEP1Q9NQW7 623 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 RDH8Q9NYR8 311 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 ERVK-18Q9QC07 812 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 SLC22A14Q9Y267 594 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 PCDHGB6Q9Y5F9 930 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 UBR2Q8IWV8 1755 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 ITGB1BP1O14713 200 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 NBNO60934 754 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 LYPLA1O75608 230 aaPredicted RBP8.71□□□□□ -1.02
COMMD3-215ENST00000602574 TIPRLO75663 272 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 ANXA1P04083 346 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 SNRPA1P09661 255 aaKnown RBP8.71□□□□□ -1.02
COMMD3-215ENST00000602574 TMEM191BP0C7N4 346 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 TMEM253P0C7T8 217 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 CEACAM6P40199 344 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 EPS8Q12929 822 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 SLAMF1Q13291 335 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 DYRK1AQ13627 763 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 RFX4Q33E94 735 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 SEL1L3Q68CR1 1132 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 DENND5BQ6ZUT9 1274 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 PAGE2Q7Z2X7 111 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 LRP10Q7Z4F1 713 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 OR2L5Q8NG80 312 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 ZNF384Q8TF68 577 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 NR4A3Q92570 626 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 C14orf144Q96I85 54 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 CDCA3Q99618 268 aaPredicted RBP8.71□□□□□ -1.02
COMMD3-215ENST00000602574 TREX2Q9BQ50 279 aaPredicted RBP8.71□□□□□ -1.02
COMMD3-215ENST00000602574 TTLL2Q9BWV7 592 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 MRPL37Q9BZE1 423 aaKnown RBP8.71□□□□□ -1.02
COMMD3-215ENST00000602574 OR51B6Q9H340 312 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 BLOC1S4Q9NUP1 217 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 SDHAF2Q9NX18 166 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 NKIRAS2Q9NYR9 191 aa8.71□□□□□ -1.02
COMMD3-215ENST00000602574 TCRBV3S1A0A5B6 114 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 E5RJQ4 531 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 K7ERQ8 282 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 PIK3R2O00459 728 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 UBE2CO00762 179 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 RRP8O43159 456 aaKnown RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 PAPSS1O43252 624 aaPredicted RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 RAD1O60671 282 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 NOL4O94818 638 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 PGK1P00558 417 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ALPLP05186 524 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 HCKP08631 526 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ERVK-10P10266 1014 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ATF2P15336 505 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 MUC1P15941 1255 aaPredicted RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 TSHRP16473 764 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 BGNP21810 368 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ACVR2AP27037 513 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 G0S2P27469 103 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ALDH3A2P51648 485 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 PRELPP51888 382 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 MAPK10P53779 464 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 SKP1P63208 163 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 CBLBQ13191 982 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 MAB21L1Q13394 359 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 SNTB1Q13884 538 aaKnown RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 POLD3Q15054 466 aaPredicted RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 SIX1Q15475 284 aaPredicted RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ATP13A4Q4VNC1 1196 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 LIN9Q5TKA1 542 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ZNF790Q6PG37 636 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 KCNT2Q6UVM3 1135 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 SLC16A13Q7RTY0 426 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 PSTKQ8IV42 348 aaKnown RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ARID3BQ8IVW6 561 aaPredicted RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 UBR7Q8N806 425 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ZNF781Q8N8C0 355 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 FAM216AQ8WUB2 273 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ASB9Q96DX5 294 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 UBXN10Q96LJ8 280 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 FAM111AQ96PZ2 611 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 CAMKK2Q96RR4 588 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 GSX2Q9BZM3 304 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 REXO4Q9GZR2 422 aaKnown RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 BLZF1Q9H2G9 400 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 CHRDQ9H2X0 955 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 TOR3AQ9H497 397 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 NRBP2Q9NSY0 501 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 FAM49BQ9NUQ9 324 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 SAGE1Q9NXZ1 904 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms