RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 FBXO15Q8NCQ5 510 aaPredicted RBP21.49■■□□□ 1.03
SNRNP70-209ENST00000601065 MOCOSQ96EN8 888 aa21.49■■□□□ 1.03
SNRNP70-209ENST00000601065 HIST1H2AHQ96KK5 128 aa21.49■■□□□ 1.03
SNRNP70-209ENST00000601065 HIST1H2AJQ99878 128 aa21.49■■□□□ 1.03
SNRNP70-209ENST00000601065 H2AFJQ9BTM1 129 aa21.49■■□□□ 1.03
SNRNP70-209ENST00000601065 GATA5Q9BWX5 397 aaPredicted RBP21.49■■□□□ 1.03
SNRNP70-209ENST00000601065 ZNF395Q9H8N7 513 aaPredicted RBP21.49■■□□□ 1.03
SNRNP70-209ENST00000601065 ACSS2Q9NR19 701 aa21.49■■□□□ 1.03
SNRNP70-209ENST00000601065 ARL15Q9NXU5 204 aa21.49■■□□□ 1.03
SNRNP70-209ENST00000601065 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.49■■□□□ 1.03
SNRNP70-209ENST00000601065 TAAR2Q9P1P5 351 aa21.49■■□□□ 1.03
SNRNP70-209ENST00000601065 ARHGEF17Q96PE2 2063 aaPredicted RBP21.49■■□□□ 1.03
SNRNP70-209ENST00000601065 TMEM131Q92545 1883 aa21.49■■□□□ 1.03
SNRNP70-209ENST00000601065 KRT87PA6NCN2 255 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 OR52A4PA6NMU1 304 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 EDF1O60869 148 aaKnown RBP21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 F3P13726 295 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 GRK2P25098 689 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 PRKAA2P54646 552 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 NAGLUP54802 743 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 AP1S2P56377 157 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 CCSMST1Q4G0I0 132 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 MBOAT1Q6ZNC8 495 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 PTGR2Q8N8N7 351 aaPredicted RBP21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 PHC3Q8NDX5 983 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 OR5AR1Q8NGP9 310 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 OR6Y1Q8NGX8 325 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 OR5K2Q8NHB8 316 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 CEP76Q8TAP6 659 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 LRFN3Q9BTN0 628 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 C20orf27Q9GZN8 174 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 NCKIPSDQ9NZQ3 722 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 SPASTQ9UBP0 616 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 TMCO1Q9UM00 188 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 CUL9Q8IWT3 2517 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 PABPN1LA6NDY0 278 aaKnown RBP21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 HALP42357 657 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 ALDH18A1P54886 795 aaKnown RBP21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 RPE65Q16518 533 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 ZNF548Q8NEK5 533 aaPredicted RBP21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 EGFL8Q99944 293 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 NSRP1Q9H0G5 558 aaKnown RBP21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 IMP3Q9NV31 184 aaKnown RBP21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 CACNA1HO95180 2353 aa21.48■■□□□ 1.03
SNRNP70-209ENST00000601065 NDUFAB1O14561 156 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 ITM2AO43736 263 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 SNNO75324 88 aaPredicted RBP21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 H2AFYO75367 372 aaKnown RBP21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 RPN2P04844 631 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 CFIP05156 583 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 ANXA5P08758 320 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 SLC1A6P48664 564 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 DNAJB13P59910 316 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 ASPHQ12797 758 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 CDKL4Q5MAI5 379 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 DUS1LQ6P1R4 473 aaKnown RBP21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 DCUN1D3Q8IWE4 304 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 TBC1D21Q8IYX1 336 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 CCNYL1Q8N7R7 359 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 MAGEC3Q8TD91 643 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 LMX1AQ8TE12 382 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 RHBDF1Q96CC6 855 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 LOXL4Q96JB6 756 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 TMEM237Q96Q45 408 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 ELF4Q99607 663 aaPredicted RBP21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 CAPN10Q9HC96 672 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 THAP1Q9NVV9 213 aa21.47■■□□□ 1.03
SNRNP70-209ENST00000601065 STX16-NPEPL1H3BU86 382 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 STX16O14662 325 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 AQP9O43315 295 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 LYPLA1O75608 230 aaPredicted RBP21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 PIAS2O75928 621 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 S100BP04271 92 aaPredicted RBP21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 OCRLQ01968 901 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 SF3A3Q12874 501 aaKnown RBP eCLIP21.46■■□□□ 1.038e-40■■■□□ 18
SNRNP70-209ENST00000601065 GRIK2Q13002 908 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 SETDB1Q15047 1291 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 TRIT1Q9H3H1 467 aaKnown RBP21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 PTBP2Q9UKA9 531 aaKnown RBP21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 PATE3B3GLJ2 98 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 MYO1CO00159 1063 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 SDC3O75056 442 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 EPN2O95208 641 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 MTHFD1P11586 935 aaKnown RBP21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 IMPDH1P20839 514 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 ARRB2P32121 409 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 AGTR2P50052 363 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 ABCE1P61221 599 aaKnown RBP21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 HERVK_113P63132 956 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 FBXO48Q5FWF7 155 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 SULT1C3Q6IMI6 304 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 IYDQ6PHW0 289 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 GKN2Q86XP6 184 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 ZNF473Q8WTR7 871 aaKnown RBP21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 L3HYPDHQ96EM0 354 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 CCDC138Q96M89 665 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 FERD3LQ96RJ6 166 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 PKP4Q99569 1192 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 ERVK-6Q9BXR3 956 aa21.46■■□□□ 1.03
SNRNP70-209ENST00000601065 FSCN3Q9NQT6 498 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms