RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 CLEC1AQ8NC01 280 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 IPMKQ8NFU5 416 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 OR13C4Q8NGS5 318 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 PROKR1Q8TCW9 393 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.89□□□□□ -1.47
VRK3-220ENST00000600259 GRHL3Q8TE85 626 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 PPP4R1Q8TF05 950 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 CTNNBL1Q8WYA6 563 aaPredicted RBP5.89□□□□□ -1.47
VRK3-220ENST00000600259 TFGQ92734 400 aaPredicted RBP5.89□□□□□ -1.47
VRK3-220ENST00000600259 RELTQ969Z4 430 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 NACC2Q96BF6 587 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 VAT1Q99536 393 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 CHP1Q99653 195 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 SLX1AQ9BQ83 275 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 WDR77Q9BQA1 342 aaPredicted RBP5.89□□□□□ -1.47
VRK3-220ENST00000600259 C17orf62Q9BQA9 187 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 MESP1Q9BRJ9 268 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 TRIM56Q9BRZ2 755 aaKnown RBP5.89□□□□□ -1.47
VRK3-220ENST00000600259 AP1M1Q9BXS5 423 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 ILKAPQ9H0C8 392 aaPredicted RBP5.89□□□□□ -1.47
VRK3-220ENST00000600259 FAM96AQ9H5X1 160 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 C10orf88Q9H8K7 445 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 ARNT2Q9HBZ2 717 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 SLC6A20Q9NP91 592 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 ZDHHC3Q9NYG2 299 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 IFT80Q9P2H3 777 aaPredicted RBP5.89□□□□□ -1.47
VRK3-220ENST00000600259 NOVA2Q9UNW9 492 aaKnown RBP5.89□□□□□ -1.47
VRK3-220ENST00000600259 SRPK3Q9UPE1 567 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 OSGIN2Q9Y236 505 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 PADI2Q9Y2J8 665 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 HS3ST3B1Q9Y662 390 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 AP1M2Q9Y6Q5 423 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 ANKRD12Q6UB98 2062 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 CSMD2Q7Z408 3487 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 CCDC88CQ9P219 2028 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 hCG_1818297A0A087WSY0 165 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 ARHGAP10A1A4S6 786 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 VSTM2BA6NLU5 285 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 C2orf81A6NN90 581 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 BHMG1C9JSJ3 638 aaPredicted RBP5.88□□□□□ -1.47
VRK3-220ENST00000600259 H7C0S8 307 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 PEX12O00623 359 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 CCL22O00626 93 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 KLHL41O60662 606 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 ALOX12BO75342 701 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 WISP2O76076 250 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 KLHL18O94889 574 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 CHRM5P08912 532 aaPredicted RBP5.88□□□□□ -1.47
VRK3-220ENST00000600259 CD63P08962 238 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 PRSS56P0CW18 603 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 COMTP21964 271 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 MMP11P24347 488 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 RBL1P28749 1068 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 FOLR3P41439 243 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 TDGF1P3P51864 188 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 TMPRSS15P98073 1019 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 AIMP2Q13155 320 aaKnown RBP5.88□□□□□ -1.47
VRK3-220ENST00000600259 TFDP2Q14188 446 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 ELOAQ14241 798 aaKnown RBP5.88□□□□□ -1.47
VRK3-220ENST00000600259 KRT33BQ14525 404 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 NKG7Q16617 165 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 DEFB110Q30KQ9 67 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 GPR33Q49SQ1 333 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 PRAMEF13Q5VWM6 474 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 RPUSD3Q6P087 351 aaKnown RBP5.88□□□□□ -1.47
VRK3-220ENST00000600259 TLDC1Q6P9B6 456 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 SNX20Q7Z614 316 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 LUZP1Q86V48 1076 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 ZC3H18Q86VM9 953 aaKnown RBP5.88□□□□□ -1.47
VRK3-220ENST00000600259 SERPINA9Q86WD7 417 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 ZGRF1Q86YA3 2104 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 MCEMP1Q8IX19 187 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 FAM20CQ8IXL6 584 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 PIANPQ8IYJ0 282 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 GPR135Q8IZ08 494 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 CLDN19Q8N6F1 224 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 ZNF655Q8N720 491 aaPredicted RBP5.88□□□□□ -1.47
VRK3-220ENST00000600259 CATSPER1Q8NEC5 780 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 OR5AR1Q8NGP9 310 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 DNAJB14Q8TBM8 379 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 HEXDCQ8WVB3 486 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 PSMF1Q92530 271 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.88□□□□□ -1.47
VRK3-220ENST00000600259 IQCDQ96DY2 449 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 RBM41Q96IZ5 413 aaKnown RBP5.88□□□□□ -1.47
VRK3-220ENST00000600259 ZNF285Q96NJ3 590 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 QKIQ96PU8 341 aaKnown RBP eCLIP5.88□□□□□ -1.47
VRK3-220ENST00000600259 DNAJC7Q99615 494 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 SPSB2Q99619 263 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 COPS8Q99627 209 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 APOL2Q9BQE5 337 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 HGH1Q9BTY7 390 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 MENTQ9BUN1 341 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 FICDQ9BVA6 458 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 SLC26A1Q9H2B4 701 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 AGPAT4Q9NRZ5 378 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 DDX56Q9NY93 547 aaKnown RBP5.88□□□□□ -1.47
VRK3-220ENST00000600259 KLHL8Q9P2G9 620 aaPredicted RBP5.88□□□□□ -1.47
VRK3-220ENST00000600259 FBXL4Q9UKA2 621 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 TRHDEQ9UKU6 1024 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms