RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 TMEM126BQ8IUX1 230 aa13.72□□□□□ -0.21
LIG1-218ENST00000599322 D2HGDHQ8N465 521 aa13.72□□□□□ -0.21
LIG1-218ENST00000599322 OR5AR1Q8NGP9 310 aa13.72□□□□□ -0.21
LIG1-218ENST00000599322 SERPINB12Q96P63 405 aa13.72□□□□□ -0.21
LIG1-218ENST00000599322 NAT9Q9BTE0 207 aa13.72□□□□□ -0.21
LIG1-218ENST00000599322 TUBB2BQ9BVA1 445 aa13.72□□□□□ -0.21
LIG1-218ENST00000599322 RAB11FIP5Q9BXF6 653 aa13.72□□□□□ -0.21
LIG1-218ENST00000599322 DDX47Q9H0S4 455 aaKnown RBP13.72□□□□□ -0.21
LIG1-218ENST00000599322 XKR8Q9H6D3 395 aa13.72□□□□□ -0.21
LIG1-218ENST00000599322 INTS10Q9NVR2 710 aaKnown RBP13.72□□□□□ -0.21
LIG1-218ENST00000599322 ACTR10Q9NZ32 417 aa13.72□□□□□ -0.21
LIG1-218ENST00000599322 MARCH4Q9P2E8 410 aaPredicted RBP13.72□□□□□ -0.21
LIG1-218ENST00000599322 TENM4Q6N022 2769 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 ZNF462Q96JM2 2506 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 AHCTF1Q8WYP5 2266 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 SLC9B1P1A6NJY1 282 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 BHMG1C9JSJ3 638 aaPredicted RBP13.71□□□□□ -0.21
LIG1-218ENST00000599322 BTN3A1O00481 513 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 TTC4O95801 387 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 EBLN1P0CF75 366 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 LIFP15018 202 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 FOLR1P15328 257 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 AOAHP28039 575 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 CCNFP41002 786 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 PPP1CAP62136 330 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 DR1Q01658 176 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 LONRF1Q17RB8 773 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 ZNF658BQ4V348 819 aaPredicted RBP13.71□□□□□ -0.21
LIG1-218ENST00000599322 ANKRD22Q5VYY1 191 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 PAPD7Q5XG87 772 aaKnown RBP13.71□□□□□ -0.21
LIG1-218ENST00000599322 NAPRTQ6XQN6 538 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 DCUN1D3Q8IWE4 304 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 KLHL7Q8IXQ5 586 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 GPR135Q8IZ08 494 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 KRT222Q8N1A0 295 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 GALNT6Q8NCL4 622 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 RAD51AP1Q96B01 352 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 SLC45A3Q96JT2 553 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 C20orf96Q9NUD7 363 aaPredicted RBP13.71□□□□□ -0.21
LIG1-218ENST00000599322 INTS7Q9NVH2 962 aaKnown RBP13.71□□□□□ -0.21
LIG1-218ENST00000599322 IRAK4Q9NWZ3 460 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.71□□□□□ -0.21
LIG1-218ENST00000599322 PCYOX1Q9UHG3 505 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 BTRCQ9Y297 605 aa13.71□□□□□ -0.21
LIG1-218ENST00000599322 IQCF5A8MTL0 148 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 GOLGA8KD6RF30 607 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 GOLGA8TH3BQL2 631 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 BTN3A3O00478 584 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 DNALI1O14645 258 aaPredicted RBP13.7□□□□□ -0.22
LIG1-218ENST00000599322 CPNE3O75131 537 aaKnown RBP13.7□□□□□ -0.22
LIG1-218ENST00000599322 KATNA1O75449 491 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 GPC4O75487 556 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 SCRG1O75711 98 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 USP1O94782 785 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 TMEM63AO94886 807 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 SLCO2B1O94956 709 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 DLGAP3O95886 979 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 HBQ1P09105 142 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 PKMP14618 531 aaKnown RBP13.7□□□□□ -0.22
LIG1-218ENST00000599322 TCN2P20062 427 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 CYP2A7P20853 494 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 DLSTP36957 453 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 STAT5AP42229 794 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 RAB28P51157 221 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 ADARP55265 1226 aaKnown RBP13.7□□□□□ -0.22
LIG1-218ENST00000599322 RPS15P62841 145 aaKnown RBP13.7□□□□□ -0.22
LIG1-218ENST00000599322 PTK6Q13882 451 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 KCNAB1Q14722 419 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 KIR2DS3Q14952 304 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 TYSND1Q2T9J0 566 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 IZUMO3Q5VZ72 239 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 ZNF470Q6ECI4 717 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 SPESP1Q6UW49 350 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 UNC5AQ6ZN44 842 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 MICALCLQ6ZW33 695 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 ZNF605Q86T29 641 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 PDIK1LQ8N165 341 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 NAT8LQ8N9F0 302 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.7□□□□□ -0.22
LIG1-218ENST00000599322 SEC14L1Q92503 715 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 TTC9Q92623 222 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 SLCO2A1Q92959 643 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 TCTN2Q96GX1 697 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 FAM167BQ9BTA0 163 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 SPRY4Q9C004 299 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 SEMA4CQ9C0C4 833 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 P2RY12Q9H244 342 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 ICKQ9UPZ9 632 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 CRYL1Q9Y2S2 319 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 NEU2Q9Y3R4 380 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 COMMD10Q9Y6G5 202 aa13.7□□□□□ -0.22
LIG1-218ENST00000599322 ASH1LQ9NR48 2969 aaKnown RBP13.7□□□□□ -0.22
LIG1-218ENST00000599322 USP27XA6NNY8 438 aa13.69□□□□□ -0.22
LIG1-218ENST00000599322 CHRM5P08912 532 aaPredicted RBP13.69□□□□□ -0.22
LIG1-218ENST00000599322 PGAM1P18669 254 aa13.69□□□□□ -0.22
LIG1-218ENST00000599322 CASQ1P31415 396 aa13.69□□□□□ -0.22
LIG1-218ENST00000599322 GPR19Q15760 415 aa13.69□□□□□ -0.22
LIG1-218ENST00000599322 TIPARPQ7Z3E1 657 aaKnown RBP13.69□□□□□ -0.22
LIG1-218ENST00000599322 TMEM135Q86UB9 458 aa13.69□□□□□ -0.22
LIG1-218ENST00000599322 CILP2Q8IUL8 1156 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms