RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 MAGEB16A2A368 324 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 NPIPB15A6NHN6 443 aaPredicted RBP13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 KIF1CO43896 1103 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 BANF1O75531 89 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 PIRTP0C851 137 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 CYP2A6P11509 494 aaPredicted RBP13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 FGF5P12034 268 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 COX6B1P14854 86 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 LHCGRP22888 699 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 VIPR1P32241 457 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 GLRBP48167 497 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 PDIA2Q13087 525 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 POU6F1Q14863 301 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 FASTKD3Q14CZ7 662 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 TAF1AQ15573 450 aaPredicted RBP13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 BBS9Q3SYG4 887 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 CEP128Q6ZU80 1094 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 TMC3Q7Z5M5 1100 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 IGDCC3Q8IVU1 814 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 GSPT2Q8IYD1 628 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 NXPE1Q8N323 547 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 EID2BQ96D98 161 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 EBNA1BP2Q99848 306 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 PLAC1Q9HBJ0 212 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 SAYSD1Q9NPB0 183 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 TBC1D29Q9UFV1 150 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 RIMKLBQ9ULI2 386 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 SOX13Q9UN79 622 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 KCNK6Q9Y257 313 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 ZNF711Q9Y462 761 aa13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 ANKHD1Q8IWZ3 2542 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-218ENST00000598907 DCHS2Q6V1P9 2916 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 FAM237BA0A1B0GVD1 139 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 AURKAO14965 403 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 ZNF30P17039 623 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 HMGCLP35914 325 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 ELK3P41970 407 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 MAGEA4P43358 317 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 CRADDP78560 199 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 PTSQ03393 145 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 ACVR1Q04771 509 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 LAMB3Q13751 1172 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 CCDC38Q502W7 563 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 PYCR3Q53H96 274 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 LYPLAL1Q5VWZ2 237 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 PWWP2BQ6NUJ5 590 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 EMBQ6PCB8 327 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 HSD11B1LQ7Z5J1 315 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 SLC9B2Q86UD5 537 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 CDH24Q86UP0 819 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 RAVER1Q8IY67 606 aaKnown RBP13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 BLOC1S5Q8TDH9 187 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 PEX13Q92968 403 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 MR1Q95460 341 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 DTD2Q96FN9 168 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 SMAD5Q99717 465 aaKnown RBP13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 NAT9Q9BTE0 207 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 TRIM8Q9BZR9 551 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 CHRAC1Q9NRG0 131 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 AGPAT4Q9NRZ5 378 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 OGFRQ9NZT2 677 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 IL17CQ9P0M4 197 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 CD84Q9UIB8 345 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 FARSAQ9Y285 508 aaKnown RBP13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 TCAF1Q9Y4C2 921 aa13.54□□□□□ -0.24
SHKBP1-218ENST00000598907 POLEQ07864 2286 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 A0A0U1RQS6 177 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 CCDC151A5D8V7 595 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 PSMD11O00231 422 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 CLDN7O95471 211 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 ASMTLO95671 621 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 CRTAMO95727 393 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 C9P02748 559 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 GPR1P46091 355 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 ZNF140P52738 457 aaPredicted RBP13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 TUBB3Q13509 450 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 LRP8Q14114 963 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 KCNAB1Q14722 419 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 SLMAPQ14BN4 828 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 BRD3Q15059 726 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 TSTD2Q5T7W7 516 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 VWA5B1Q5TIE3 1220 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 STEAP4Q687X5 459 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 LRRC66Q68CR7 880 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 FAM92BQ6ZTR7 304 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 Q6ZVL8 140 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 CHST15Q7LFX5 561 aaPredicted RBP13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 NLRP9Q7RTR0 991 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 GLT6D1Q7Z4J2 308 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 TSPAN33Q86UF1 283 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 CCDC25Q86WR0 208 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 ZBED8Q8IZ13 594 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 FBXO36Q8NEA4 188 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 PPHLN1Q8NEY8 458 aaKnown RBP13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 CAVIN3Q969G5 261 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 ZNF778Q96MU6 729 aa13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.53□□□□□ -0.24
SHKBP1-218ENST00000598907 EPB41L1Q9H4G0 881 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms