RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 RASGRP1O95267 797 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 SYF2O95926 243 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 C2P06681 752 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 SLC35E2BP0CK96 405 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 ACP5P13686 325 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 ZNF37AP17032 561 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 DGKAP23743 735 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 AOAHP28039 575 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 SLC26A3P40879 764 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 CCNFP41002 786 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 BLKP51451 505 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 IL2P60568 153 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 PLOD1Q02809 727 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 PPARDQ03181 441 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 FAM83EQ2M2I3 478 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 ALG11Q2TAA5 492 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 TNFAIP8L3Q5GJ75 292 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 PLEKHS1Q5SXH7 462 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 KLC3Q6P597 504 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 PAQR3Q6TCH7 311 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 RD3Q7Z3Z2 195 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 LCA5Q86VQ0 697 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 AMZ2Q86W34 360 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 HID1Q8IV36 788 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 CPNE9Q8IYJ1 553 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 LSMEM2Q8N112 164 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 NKAPQ8N5F7 415 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 OR2L2Q8NH16 312 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 ASZ1Q8WWH4 475 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 OR1E3Q8WZA6 343 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 LINGO1Q96FE5 620 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 PDXPQ96GD0 296 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 LIN37Q96GY3 246 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 LINC00615Q96LM1 132 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 SELENOSQ9BQE4 189 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 TIMM29Q9BSF4 260 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 SLC13A1Q9BZW2 595 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 MRPL40Q9NQ50 206 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 GPR27Q9NS67 375 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 PRKAB1Q9Y478 270 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 C17orf113A0A1B0GUU1 675 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 A0A1W2PR77 199 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 BLACEA4D250 179 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 MGAT4DA6NG13 374 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 H3BM21 787 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 EIF3FO00303 357 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 VILLO15195 856 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 TNFP01375 233 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 WNT1P04628 370 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 GSTA1P08263 222 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 LTA4HP09960 611 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 CCDC166P0CW27 439 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 CBSLP0DN79 551 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 COL6A2P12110 1019 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 ENO3P13929 434 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 BRAFP15056 766 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 CCR7P32248 378 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 HPDP32754 393 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 CBSP35520 551 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 CCT5P48643 541 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 GABREP78334 506 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 HSPA14Q0VDF9 509 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 LRP8Q14114 963 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 FZD2Q14332 565 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 CSHL1Q14406 222 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 SEPT7Q16181 437 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 TSNAXIP1Q2TAA8 658 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 PYCR3Q53H96 274 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 TPRG1LQ5T0D9 272 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 AGAP9Q5VTM2 703 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 CHST15Q7LFX5 561 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 EXOC3L1Q86VI1 746 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 ZNF547Q8IVP9 402 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 MYO1HQ8N1T3 1032 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 OXR1Q8N573 874 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 GIMAP7Q8NHV1 300 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 SKA2Q8WVK7 121 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 GLMNQ92990 594 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 TSACCQ96A04 125 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 SCARF2Q96GP6 870 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 SLC30A3Q99726 388 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 OSGEPL1Q9H4B0 414 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 COG4Q9H9E3 785 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 SSU72Q9NP77 194 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 KCNK9Q9NPC2 374 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 LATS2Q9NRM7 1088 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 DNAJC28Q9NX36 388 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 MKS1Q9NXB0 559 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 GALPQ9UBC7 116 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 TSR3Q9UJK0 312 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 DNAJC16Q9Y2G8 782 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 MED16Q9Y2X0 877 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 DGKBQ9Y6T7 804 aa11.78□□□□□ -0.52
SHKBP1-213ENST00000597325 PDZD2O15018 2839 aa11.77□□□□□ -0.53
SHKBP1-213ENST00000597325 PABPN1LA6NDY0 278 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-213ENST00000597325 EFSO43281 561 aa11.77□□□□□ -0.53
SHKBP1-213ENST00000597325 KCNJ13O60928 360 aa11.77□□□□□ -0.53
SHKBP1-213ENST00000597325 SPAG7O75391 227 aa11.77□□□□□ -0.53
SHKBP1-213ENST00000597325 KLHL2O95198 593 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms