RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 SEC14L1Q92503 715 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 INPP5DQ92835 1189 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 FAM136AQ96C01 138 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 ASPSCR1Q9BZE9 553 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 FBXO8Q9NRD0 319 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 FAM114A2Q9NRY5 505 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 NSMCE4AQ9NXX6 385 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 SLC39A1Q9NY26 324 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 OR6C2Q9NZP2 312 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 GALPQ9UBC7 116 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 CORO1CQ9ULV4 474 aaPredicted RBP14.59□□□□□ -0.07
UPF1-202ENST00000594243 RAXQ9Y2V3 346 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 DHRS7Q9Y394 339 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 GSAPA4D1B5 854 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 C2orf74A8MZ97 194 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 BTN3A3O00478 584 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 KIF1CO43896 1103 aaKnown RBP14.58□□□□□ -0.08
UPF1-202ENST00000594243 F7P08709 466 aaPredicted RBP14.58□□□□□ -0.08
UPF1-202ENST00000594243 GSTA2P09210 222 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 CBSLP0DN79 551 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 CD82P27701 267 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 CBSP35520 551 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 CCNFP41002 786 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 ARL4DP49703 201 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 ILF2Q12905 390 aaKnown RBP14.58□□□□□ -0.08
UPF1-202ENST00000594243 TRADDQ15628 312 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 KYNUQ16719 465 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 KLHL38Q2WGJ6 581 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 ZDHHC24Q6UX98 284 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 CEP128Q6ZU80 1094 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 C3orf62Q6ZUJ4 267 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 NEK10Q6ZWH5 1172 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 CYS1Q717R9 158 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 SLC26A11Q86WA9 606 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 RAB42Q8N4Z0 105 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 BMPERQ8N8U9 685 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 SIDT2Q8NBJ9 832 aaKnown RBP14.58□□□□□ -0.08
UPF1-202ENST00000594243 RAD51AP1Q96B01 352 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 TEFMQ96QE5 360 aaKnown RBP14.58□□□□□ -0.08
UPF1-202ENST00000594243 MAP3K3Q99759 626 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 ZPBPQ9BS86 351 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 DDA1Q9BW61 102 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 FAM129AQ9BZQ8 928 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 XKR8Q9H6D3 395 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 C1GALT1Q9NS00 363 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 TAS2R13Q9NYV9 303 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 ACSL6Q9UKU0 697 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 ICKQ9UPZ9 632 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 PCDHB11Q9Y5F2 797 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 PCDHGA3Q9Y5H0 932 aa14.58□□□□□ -0.08
UPF1-202ENST00000594243 IGHV5-51A0A0C4DH38 117 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 ESYT3A0FGR9 886 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 PIPSLA2A3N6 862 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 C9orf172C9J069 976 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 EIF3FO00303 357 aaPredicted RBP14.57□□□□□ -0.08
UPF1-202ENST00000594243 BTN3A1O00481 513 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 POLR1CO15160 346 aaPredicted RBP14.57□□□□□ -0.08
UPF1-202ENST00000594243 MAP3K7O43318 606 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 PRAMEF10O60809 474 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 MATN4O95460 622 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 C1orf105O95561 183 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 ZBTB11O95625 1053 aaPredicted RBP14.57□□□□□ -0.08
UPF1-202ENST00000594243 TPBGLP0DKB5 382 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 ENO3P13929 434 aaPredicted RBP14.57□□□□□ -0.08
UPF1-202ENST00000594243 NELFEP18615 380 aaKnown RBP14.57□□□□□ -0.08
UPF1-202ENST00000594243 CD9P21926 228 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 GABRB3P28472 473 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 PRDX3P30048 256 aaKnown RBP14.57□□□□□ -0.08
UPF1-202ENST00000594243 SSTR1P30872 391 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 KPNA2P52292 529 aaKnown RBP14.57□□□□□ -0.08
UPF1-202ENST00000594243 PPP1CAP62136 330 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 HSD11B2P80365 405 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 ACSBG2Q5FVE4 666 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 CEACAM20Q6UY09 585 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 CCDC25Q86WR0 208 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 ADGRF3Q8IZF5 1079 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 NOA1Q8NC60 698 aaKnown RBP14.57□□□□□ -0.08
UPF1-202ENST00000594243 CDKL2Q92772 493 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 DCBLD2Q96PD2 775 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 GPR21Q99679 349 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 RAB11FIP5Q9BXF6 653 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 DPH1Q9BZG8 443 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 TSPYL1Q9H0U9 437 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 ACTR10Q9NZ32 417 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 MTRF1LQ9UGC7 380 aaKnown RBP14.57□□□□□ -0.08
UPF1-202ENST00000594243 TRMT6Q9UJA5 497 aaKnown RBP14.57□□□□□ -0.08
UPF1-202ENST00000594243 POMT2Q9UKY4 750 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 SLC39A10Q9ULF5 831 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 MED16Q9Y2X0 877 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 UNC13CQ8NB66 2214 aa14.57□□□□□ -0.08
UPF1-202ENST00000594243 A0A087WV48 116 aa14.56□□□□□ -0.08
UPF1-202ENST00000594243 MPC1LP0DKB6 136 aa14.56□□□□□ -0.08
UPF1-202ENST00000594243 CDH3P22223 829 aa14.56□□□□□ -0.08
UPF1-202ENST00000594243 MAGEA4P43358 317 aa14.56□□□□□ -0.08
UPF1-202ENST00000594243 RAB28P51157 221 aa14.56□□□□□ -0.08
UPF1-202ENST00000594243 FOXM1Q08050 763 aa14.56□□□□□ -0.08
UPF1-202ENST00000594243 IL11RAQ14626 422 aa14.56□□□□□ -0.08
UPF1-202ENST00000594243 TMTC4Q5T4D3 741 aa14.56□□□□□ -0.08
UPF1-202ENST00000594243 LRRC8EQ6NSJ5 796 aa14.56□□□□□ -0.08
UPF1-202ENST00000594243 FAM45BPQ6NSW5 357 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms