RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 SPHK1Q9NYA1 384 aa17.35■□□□□ 0.37
CIRBP-243ENST00000593128 SLC2A6Q9UGQ3 507 aa17.35■□□□□ 0.37
CIRBP-243ENST00000593128 CIDEBQ9UHD4 219 aa17.35■□□□□ 0.37
CIRBP-243ENST00000593128 GPN3Q9UHW5 284 aaPredicted RBP17.35■□□□□ 0.37
CIRBP-243ENST00000593128 G3BP2Q9UN86 482 aaKnown RBP17.35■□□□□ 0.37
CIRBP-243ENST00000593128 ZNF148Q9UQR1 794 aa17.35■□□□□ 0.37
CIRBP-243ENST00000593128 QSOX1O00391 747 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 VPS4BO75351 444 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 OR2B3O76000 313 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 GOT2P00505 430 aaKnown RBP17.34■□□□□ 0.37
CIRBP-243ENST00000593128 CHRM5P08912 532 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-243ENST00000593128 FOXN2P32314 431 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 SLC9A5Q14940 896 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 NCF4Q15080 339 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 KYNUQ16719 465 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 AFTPHQ6ULP2 937 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 FAM198BQ6UWH4 519 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 ZNF517Q6ZMY9 492 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-243ENST00000593128 CFAP61Q8NHU2 1237 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 C1orf54Q8WWF1 131 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 FAM60AQ9NP50 221 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 POLG2Q9UHN1 485 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 VPS4AQ9UN37 437 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 RELNP78509 3460 aa17.34■□□□□ 0.37
CIRBP-243ENST00000593128 HEATR9A2RTY3 570 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 LIASO43766 372 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 HBQ1P09105 142 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 ETS1P14921 441 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 GRIA1P42261 906 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 ATP1A4Q13733 1029 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 LYPLAL1Q5VWZ2 237 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 PACS1Q6VY07 963 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 TAX1BP1Q86VP1 789 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 TMEM139Q8IV31 216 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 FAM20CQ8IXL6 584 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 TBC1D21Q8IYX1 336 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 FAM26EQ8N5C1 309 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 C2orf73Q8N5S3 287 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-243ENST00000593128 FDCSPQ8NFU4 85 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 OR13J1Q8NGT2 312 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 CPT1CQ8TCG5 803 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 TCTN2Q96GX1 697 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 HES6Q96HZ4 224 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 OR2A14Q96R47 310 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 SPRTNQ9H040 489 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-243ENST00000593128 RAB6BQ9NRW1 208 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 PADI2Q9Y2J8 665 aa17.33■□□□□ 0.36
CIRBP-243ENST00000593128 DOPEY2Q9Y3R5 2298 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 A0A0J9YY10 115 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 BHMG1C9JSJ3 638 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-243ENST00000593128 F8W8V4 182 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 HCRTR1O43613 425 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 KDM1AO60341 852 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 CBSLP0DN79 551 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 GNLYP22749 145 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 ACADLP28330 430 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 CBSP35520 551 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 FDFT1P37268 417 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 UQCRFS1P47985 274 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 PRAMEP78395 509 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 HSPA14Q0VDF9 509 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 ZIC1Q15915 447 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 FASTKD1Q53R41 847 aaKnown RBP17.32■□□□□ 0.36
CIRBP-243ENST00000593128 TSTD2Q5T7W7 516 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 LDB1Q86U70 411 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-243ENST00000593128 RAB43Q86YS6 212 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 ZBTB2Q8N680 514 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 ZNF655Q8N720 491 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-243ENST00000593128 CCDC89Q8N998 374 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 OR5K2Q8NHB8 316 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 ADAMTS17Q8TE56 1095 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 TXLNGQ9NUQ3 528 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 DHCR7Q9UBM7 475 aaKnown RBP17.32■□□□□ 0.36
CIRBP-243ENST00000593128 GUCA1BQ9UMX6 200 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 KLHL20Q9Y2M5 609 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 ZNF451Q9Y4E5 1061 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 PCDHGA9Q9Y5G4 932 aaKnown RBP17.32■□□□□ 0.36
CIRBP-243ENST00000593128 MED13Q9UHV7 2174 aa17.32■□□□□ 0.36
CIRBP-243ENST00000593128 SLC5A10A0PJK1 596 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 ERI2A8K979 691 aaKnown RBP17.31■□□□□ 0.36
CIRBP-243ENST00000593128 IQCF5A8MTL0 148 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 CAPN1P07384 714 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 APRTP07741 180 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 CTSBP07858 339 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 MSL3P1P0C860 447 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 ADRA1DP25100 572 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 STIP1P31948 543 aaKnown RBP17.31■□□□□ 0.36
CIRBP-243ENST00000593128 SRSF1Q07955 248 aaKnown RBP eCLIP17.31■□□□□ 0.361e-12■□□□□ 8.7
CIRBP-243ENST00000593128 LMNTD1Q8N9Z9 388 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 PPHLN1Q8NEY8 458 aaKnown RBP17.31■□□□□ 0.36
CIRBP-243ENST00000593128 OR4L1Q8NH43 312 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 SGSM3Q96HU1 749 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 ZNF778Q96MU6 729 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 DPH2Q9BQC3 489 aaPredicted RBP17.31■□□□□ 0.36
CIRBP-243ENST00000593128 NUDT9Q9BW91 350 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 TSSK1BQ9BXA7 367 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 OR6C2Q9NZP2 312 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 IFT80Q9P2H3 777 aaPredicted RBP17.31■□□□□ 0.36
CIRBP-243ENST00000593128 NDOR1Q9UHB4 597 aa17.31■□□□□ 0.36
CIRBP-243ENST00000593128 ANAPC5Q9UJX4 755 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms