RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 EBLN1P0CF75 366 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 MTHFD1P11586 935 aaKnown RBP9.19□□□□□ -0.94
BRCA1-226ENST00000591534 FOLR1P15328 257 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 HLA-DPA1P20036 260 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 NR1D1P20393 614 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 COMTP21964 271 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 LPOP22079 712 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-226ENST00000591534 PTPN7P35236 360 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 CCL11P51671 97 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 METRNLQ641Q3 311 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 MED25Q71SY5 747 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 C11orf96Q7Z7L8 435 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 D2HGDHQ8N465 521 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 SPATA22Q8NHS9 363 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 GRK7Q8WTQ7 553 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 SSC4DQ8WTU2 575 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 NUDT8Q8WV74 236 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.19□□□□□ -0.94
BRCA1-226ENST00000591534 DCUN1D1Q96GG9 259 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 LRFN5Q96NI6 719 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 OLFM3Q96PB7 478 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 MAP3K3Q99759 626 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 C17orf62Q9BQA9 187 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 DPH2Q9BQC3 489 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-226ENST00000591534 CCM2Q9BSQ5 444 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 FSD1LQ9BXM9 530 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 FAM129AQ9BZQ8 928 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 TGIF2Q9GZN2 237 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 SRA1Q9HD15 236 aaKnown RBP9.19□□□□□ -0.94
BRCA1-226ENST00000591534 BPIFA1Q9NP55 256 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 SLAMF7Q9NQ25 335 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 KLHL8Q9P2G9 620 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-226ENST00000591534 SNX7Q9UNH6 387 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 TRIM33Q9UPN9 1127 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 WDR37Q9Y2I8 494 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 MRFAP1Q9Y605 127 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 CAPN6Q9Y6Q1 641 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 LOC285095A0A1B0GVY8 99 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 MGAT4DA6NG13 374 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 ARGFXA6NJG6 315 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 C2orf81A6NN90 581 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 STX7O15400 261 aaKnown RBP9.18□□□□□ -0.94
BRCA1-226ENST00000591534 ZFC3H1O60293 1989 aaKnown RBP9.18□□□□□ -0.94
BRCA1-226ENST00000591534 DDAH2O95865 285 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 IGHEP01854 428 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 HBQ1P09105 142 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 PTPN3P26045 913 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 MAP2K3P46734 347 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 WNT3AP56704 352 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 DYNLT1P63172 113 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 RELNP78509 3460 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 MPP3Q13368 585 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 KCNAB1Q14722 419 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 FNBP1LQ5T0N5 605 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 GPRC6AQ5T6X5 926 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 CAPRIN2Q6IMN6 1127 aaKnown RBP9.18□□□□□ -0.94
BRCA1-226ENST00000591534 MFSD7Q6UXD7 560 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 FAM151BQ6UXP7 276 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 C1orf229Q6ZS94 237 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-226ENST00000591534 CEP128Q6ZU80 1094 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 SYDE1Q6ZW31 735 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-226ENST00000591534 PID1Q7Z2X4 250 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 ZNF572Q7Z3I7 529 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-226ENST00000591534 TMEM135Q86UB9 458 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 C17orf53Q8N3J3 647 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-226ENST00000591534 RASGEF1AQ8N9B8 481 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 BLOC1S5Q8TDH9 187 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 HEXDCQ8WVB3 486 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 P3H4Q92791 437 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 CLIP3Q96DZ5 547 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 C12orf66Q96MD2 445 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 IP6K3Q96PC2 410 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 MDFIQ99750 246 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 TLR10Q9BXR5 811 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 NLNQ9BYT8 704 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 KIR3DX1Q9H7L2 352 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 VPS37BQ9H9H4 285 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 ARGLU1Q9NWB6 273 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-226ENST00000591534 SMOXQ9NWM0 555 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 UBP1Q9NZI7 540 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 IL17CQ9P0M4 197 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 SAE1Q9UBE0 346 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-226ENST00000591534 PLEKHB1Q9UF11 243 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-226ENST00000591534 SERTAD3Q9UJW9 196 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 TRHDEQ9UKU6 1024 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 PSMD13Q9UNM6 376 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 PADI2Q9Y2J8 665 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 SPO11Q9Y5K1 396 aa9.18□□□□□ -0.94
BRCA1-226ENST00000591534 OR6C74A6NCV1 312 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 OR2AG2A6NM03 316 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 ADARB2-AS1A8MUL3 147 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 C9J4A7 227 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 K7EM74 188 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 IFRD1O00458 451 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-226ENST00000591534 AURKAO14965 403 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 CEP104O60308 925 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 UGT1A9O60656 530 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 SMNDC1O75940 238 aaKnown RBP eCLIP9.17□□□□□ -0.94
BRCA1-226ENST00000591534 DNAJB5O75953 348 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 ANXA9O76027 345 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms