RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 ATXN7L3BQ96GX2 97 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 C9orf72Q96LT7 481 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 GSDMCQ9BYG8 508 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 FAM129AQ9BZQ8 928 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 TRIM8Q9BZR9 551 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 SYNDIG1Q9H7V2 258 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 ERVMER34-1Q9H9K5 563 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 SARS2Q9NP81 518 aaKnown RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 FBXO6Q9NRD1 293 aaPredicted RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 IARS2Q9NSE4 1012 aaKnown RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 ZDHHC18Q9NUE0 388 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 FTSJ1Q9UET6 329 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 SF3B6Q9Y3B4 125 aaKnown RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 PLEKHM1Q9Y4G2 1056 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 PCDHA9Q9Y5H5 950 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 PCYT1BQ9Y5K3 369 aaPredicted RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 TEX264Q9Y6I9 313 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 DGKBQ9Y6T7 804 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 CNOT1A5YKK6 2376 aaKnown RBP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 ZCWPW2A0A1B0GU75 182 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 MAGEB16A2A368 324 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 GPR89AB7ZAQ6 455 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 E7ESA3 106 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 LMO7DNF2Z398 122 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 CDX4O14627 284 aaPredicted RBP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 KMOO15229 486 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 FLRT2O43155 660 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 TPD52L2O43399 206 aaKnown RBP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 NUAK1O60285 661 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 PEX14O75381 377 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 ALX3O95076 343 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 ACSL3O95573 720 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 FTH1P02794 183 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 GPR89BP0CG08 455 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 ZNF883P0CG24 379 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 ATP1B2P14415 290 aaPredicted RBP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 ZNF7P17097 686 aaPredicted RBP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 OGNP20774 298 aaKnown RBP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 TGM1P22735 817 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 ECHS1P30084 290 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 STX2P32856 288 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 PPARGP37231 505 aaPredicted RBP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 NSG1P42857 185 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 MAGEA4P43358 317 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 ARCN1P48444 511 aaKnown RBP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 PRLHRP49683 370 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 CSE1LP55060 971 aaKnown RBP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 TMEM115Q12893 351 aaPredicted RBP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 CTBP1Q13363 440 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 EFTUD2Q15029 972 aaKnown RBP eCLIP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 BRD3Q15059 726 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 TMED2Q15363 201 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 TYSND1Q2T9J0 566 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 BCL7AQ4VC05 210 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 PYCR3Q53H96 274 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 LYPLAL1Q5VWZ2 237 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 ZCCHC8Q6NZY4 707 aaKnown RBP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 TMEM220Q6QAJ8 160 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 PACS1Q6VY07 963 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 CERS6Q6ZMG9 384 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 TMEM135Q86UB9 458 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 GKN2Q86XP6 184 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 DENND6AQ8IWF6 608 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 CTAGE3PQ8IX95 158 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 PALM2Q8IXS6 379 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 FAM46DQ8NEK8 389 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 DEFB124Q8NES8 71 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 GABPB2Q8TAK5 448 aaPredicted RBP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 LKAAEAR1Q8TD35 194 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 CALML6Q8TD86 181 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 SAP25Q8TEE9 199 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 HEXDCQ8WVB3 486 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 SEC14L1Q92503 715 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 USP7Q93009 1102 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 SGF29Q96ES7 293 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 CAMK1GQ96NX5 476 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 C19orf43Q9BQ61 176 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 TIMM29Q9BSF4 260 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 TSSK1BQ9BXA7 367 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 FOXP3Q9BZS1 431 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 CCDC68Q9H2F9 335 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 CDC42EP4Q9H3Q1 356 aaKnown RBP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 IFT22Q9H7X7 185 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 RMI1Q9H9A7 625 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 RRAGDQ9NQL2 400 aaPredicted RBP6.28□□□□□ -1.4
VPS4B-205ENST00000591383 KLC4Q9NSK0 619 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 NINJ2Q9NZG7 142 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 TAAR2Q9P1P5 351 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 TXNDC16Q9P2K2 825 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 GNPTGQ9UJJ9 305 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 GPR34Q9UPC5 381 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 BTBD3Q9Y2F9 522 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 PRSS21Q9Y6M0 314 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 FAM169AQ9Y6X4 670 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 SPTBN2O15020 2390 aa6.28□□□□□ -1.4
VPS4B-205ENST00000591383 COL5A1P20908 1838 aaPredicted RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 ARHGEF17Q96PE2 2063 aaPredicted RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 IGLV3-16A0A075B6K0 115 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 TCRBV9S1A1TA0A576 114 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 NEMP2A6NFY4 417 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms