RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 C2orf74A8MZ97 194 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 E5RI56 91 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 K7ENP7 123 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 EFSO43281 561 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 KDM1AO60341 852 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 STK17BO94768 372 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 ZBTB11O95625 1053 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-223ENST00000591239 RPN2P04844 631 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 F7P08709 466 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-223ENST00000591239 TPBGLP0DKB5 382 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 ERVK-10P10266 1014 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 PKMP14618 531 aaKnown RBP8.91□□□□□ -0.98
DNMT1-223ENST00000591239 CHRM3P20309 590 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 CDH3P22223 829 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 SHMT2P34897 504 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 ELK3P41970 407 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 SLC1A2P43004 574 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 RPL21P46778 160 aaKnown RBP8.91□□□□□ -0.98
DNMT1-223ENST00000591239 ARL4DP49703 201 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 MRPS25P82663 173 aaKnown RBP8.91□□□□□ -0.98
DNMT1-223ENST00000591239 VAC14Q08AM6 782 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 TUBB3Q13509 450 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 HIF1AQ16665 826 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 SPANXN3Q5MJ09 141 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 HP1BP3Q5SSJ5 553 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-223ENST00000591239 ARHGAP40Q5TG30 622 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 CYB5D1Q6P9G0 228 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 INO80CQ6PI98 192 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-223ENST00000591239 UNC5DQ6UXZ4 953 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 UNC5AQ6ZN44 842 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 CCDC81Q6ZN84 652 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 MAATS1Q7Z4T9 603 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 KCNMB4Q86W47 210 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 D2HGDHQ8N465 521 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 SKA2Q8WVK7 121 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-223ENST00000591239 NKD1Q969G9 470 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 LRRC39Q96DD0 335 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 ELMO2Q96JJ3 720 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 C16orf45Q96MC5 204 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-223ENST00000591239 PWWP2AQ96N64 755 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 ERP44Q9BS26 406 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 FAM167BQ9BTA0 163 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 ULBP3Q9BZM4 244 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 OCEL1Q9H607 264 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 PDE7BQ9NP56 450 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 LATS2Q9NRM7 1088 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 C1GALT1Q9NS00 363 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 IARS2Q9NSE4 1012 aaKnown RBP8.91□□□□□ -0.98
DNMT1-223ENST00000591239 ACTR10Q9NZ32 417 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 OR6C2Q9NZP2 312 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 GALPQ9UBC7 116 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 FBXO5Q9UKT4 447 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 PLAGL1Q9UM63 463 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 SNX24Q9Y343 169 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 TMEM184BQ9Y519 407 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-223ENST00000591239 TEX264Q9Y6I9 313 aa8.91□□□□□ -0.98
DNMT1-223ENST00000591239 PIPSLA2A3N6 862 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 FAM187AA6NFU0 413 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 SLC9B1P1A6NJY1 282 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 RAD51CO43502 376 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 RAD1O60671 282 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 HAUS5O94927 633 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 C1orf105O95561 183 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 CHRM5P08912 532 aaPredicted RBP8.9□□□□□ -0.98
DNMT1-223ENST00000591239 EBLN1P0CF75 366 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 FGF5P12034 268 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 ZNF28P17035 718 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 MAP4P27816 1152 aaKnown RBP8.9□□□□□ -0.98
DNMT1-223ENST00000591239 ATP5DP30049 168 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 ATP1A2P50993 1020 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 CLCN7P51798 805 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 ARL4CP56559 192 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 TUBB4BP68371 445 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 FOXK1P85037 733 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 MPP1Q00013 466 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 ACY1Q03154 408 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 C2orf54Q08AI8 447 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 SRSF6Q13247 344 aaKnown RBP8.9□□□□□ -0.98
DNMT1-223ENST00000591239 TUBB2AQ13885 445 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 GBX1Q14549 363 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 KYNUQ16719 465 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.9□□□□□ -0.98
DNMT1-223ENST00000591239 MANEAQ5SRI9 462 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 ZNF549Q6P9A3 640 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 TTC23LQ6PF05 361 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 FBXO38Q6PIJ6 1188 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 CNSTQ6PJW8 725 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 SPESP1Q6UW49 350 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 TIPARPQ7Z3E1 657 aaKnown RBP8.9□□□□□ -0.98
DNMT1-223ENST00000591239 GPR155Q7Z3F1 870 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 ZNF572Q7Z3I7 529 aaPredicted RBP8.9□□□□□ -0.98
DNMT1-223ENST00000591239 VASH2Q86V25 355 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 PPP1R3BQ86XI6 285 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 RASGRP3Q8IV61 690 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 DCUN1D3Q8IWE4 304 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 CACNA2D3Q8IZS8 1091 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 NLGN4XQ8N0W4 816 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 ZBTB2Q8N680 514 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 IL22RA1Q8N6P7 574 aa8.9□□□□□ -0.98
DNMT1-223ENST00000591239 C2CD4AQ8NCU7 369 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms