RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 ABRQ12979 859 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 GLE1Q53GS7 698 aaKnown RBP11.55□□□□□ -0.56
LIG3-213ENST00000590630 TTC23LQ6PF05 361 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 TRMT10BQ6PF06 316 aaKnown RBP11.55□□□□□ -0.56
LIG3-213ENST00000590630 CNSTQ6PJW8 725 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 ZDHHC24Q6UX98 284 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 KMT5CQ86Y97 462 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 CEP112Q8N8E3 955 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 ZNF248Q8NDW4 579 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 CFAP61Q8NHU2 1237 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 KLHL6Q8WZ60 621 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 FAM136AQ96C01 138 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 TEFMQ96QE5 360 aaKnown RBP11.55□□□□□ -0.56
LIG3-213ENST00000590630 AARSD1Q9BTE6 412 aaKnown RBP11.55□□□□□ -0.56
LIG3-213ENST00000590630 DDA1Q9BW61 102 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 ASPSCR1Q9BZE9 553 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 FAM129AQ9BZQ8 928 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 SAYSD1Q9NPB0 183 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 FBXO8Q9NRD0 319 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 OCIAD1Q9NX40 245 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 SIDT1Q9NXL6 827 aaKnown RBP11.55□□□□□ -0.56
LIG3-213ENST00000590630 SLC39A1Q9NY26 324 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 MOCS1Q9NZB8 636 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 ZFATQ9P243 1243 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 POMT2Q9UKY4 750 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 CORO1CQ9ULV4 474 aaPredicted RBP11.55□□□□□ -0.56
LIG3-213ENST00000590630 ICKQ9UPZ9 632 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 TDRKHQ9Y2W6 561 aaKnown RBP11.55□□□□□ -0.56
LIG3-213ENST00000590630 MED16Q9Y2X0 877 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 LOC400499M0QZD8 3231 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 ANKRD12Q6UB98 2062 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 A0A087WV48 116 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 IGHV5-51A0A0C4DH38 117 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 ESYT3A0FGR9 886 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 GSAPA4D1B5 854 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 C2orf74A8MZ97 194 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 C9orf172C9J069 976 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 EIF3FO00303 357 aaPredicted RBP11.54□□□□□ -0.56
LIG3-213ENST00000590630 BTN3A3O00478 584 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 BTN3A1O00481 513 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 PRAMEF10O60809 474 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 VPS26AO75436 327 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 MATN4O95460 622 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 AHSGP02765 367 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 F7P08709 466 aaPredicted RBP11.54□□□□□ -0.56
LIG3-213ENST00000590630 GSTA2P09210 222 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 CBSLP0DN79 551 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 ENO3P13929 434 aaPredicted RBP11.54□□□□□ -0.56
LIG3-213ENST00000590630 NELFEP18615 380 aaKnown RBP11.54□□□□□ -0.56
LIG3-213ENST00000590630 POLR2CP19387 275 aaPredicted RBP11.54□□□□□ -0.56
LIG3-213ENST00000590630 GABRB3P28472 473 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 CBSP35520 551 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 CCNFP41002 786 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 SKIV2L2P42285 1042 aaKnown RBP11.54□□□□□ -0.56
LIG3-213ENST00000590630 SEPHS1P49903 392 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 RAB28P51157 221 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 KPNA2P52292 529 aaKnown RBP11.54□□□□□ -0.56
LIG3-213ENST00000590630 MC2RQ01718 297 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 GUCY2DQ02846 1103 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 ILF2Q12905 390 aaKnown RBP11.54□□□□□ -0.56
LIG3-213ENST00000590630 TRADDQ15628 312 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 DCAF12Q5T6F0 453 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 UGT3A1Q6NUS8 523 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 CYB5D1Q6P9G0 228 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 NEK10Q6ZWH5 1172 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 SLC26A11Q86WA9 606 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 PALM2Q8IXS6 379 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 ADGRF3Q8IZF5 1079 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 SIDT2Q8NBJ9 832 aaKnown RBP11.54□□□□□ -0.56
LIG3-213ENST00000590630 NOA1Q8NC60 698 aaKnown RBP11.54□□□□□ -0.56
LIG3-213ENST00000590630 GIMAP7Q8NHV1 300 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 CD200R1Q8TD46 325 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 MAGEC3Q8TD91 643 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 INPP5DQ92835 1189 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 USP7Q93009 1102 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 SLC41A2Q96JW4 573 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 GPR21Q99679 349 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 MAP3K3Q99759 626 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 ZPBPQ9BS86 351 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 RAB11FIP5Q9BXF6 653 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 XKR8Q9H6D3 395 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 FAM114A2Q9NRY5 505 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 C1GALT1Q9NS00 363 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 NSMCE4AQ9NXX6 385 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 TAS2R13Q9NYV9 303 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 GALPQ9UBC7 116 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 DHRS7Q9Y394 339 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 PCDHB11Q9Y5F2 797 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 PTPRQQ9UMZ3 2332 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 MGAQ8IWI9 3026 aa11.54□□□□□ -0.56
LIG3-213ENST00000590630 PIPSLA2A3N6 862 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.53□□□□□ -0.56
LIG3-213ENST00000590630 C1orf105O95561 183 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 ZBTB11O95625 1053 aaPredicted RBP11.53□□□□□ -0.56
LIG3-213ENST00000590630 CHRM5P08912 532 aaPredicted RBP11.53□□□□□ -0.56
LIG3-213ENST00000590630 TPBGLP0DKB5 382 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 CD9P21926 228 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 PRDX3P30048 256 aaKnown RBP11.53□□□□□ -0.56
LIG3-213ENST00000590630 PKLRP30613 574 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 ARL4DP49703 201 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms