RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	IER5L	Q5T953	404 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	AGBL4	Q5VU57	503 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	FAM46C	Q5VWP2	391 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	KIAA1211L	Q6NV74	962 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	TMEM53	Q6P2H8	277 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	RAB44	Q7Z6P3	723 aa	Predicted RBP	15.07	■□□□□ 0
DDX39A-209	ENST00000589318	TICAM1	Q8IUC6	712 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	MYO1H	Q8N1T3	1032 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	RAB7B	Q96AH8	199 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	WDR55	Q9H6Y2	383 aa	Predicted RBP	15.07	■□□□□ 0
DDX39A-209	ENST00000589318	EML4	Q9HC35	981 aa	Known RBP	15.07	■□□□□ 0
DDX39A-209	ENST00000589318	UTP6	Q9NYH9	597 aa	Known RBP	15.07	■□□□□ 0
DDX39A-209	ENST00000589318	SERGEF	Q9UGK8	458 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318		A0A1W2PPC1	479 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	AP2A2	O94973	939 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	EGF	P01133	1207 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	CBSL	P0DN79	551 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	ATP6V1B1	P15313	513 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	CBS	P35520	551 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	SLC25A3	Q00325	362 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	DPT	Q07507	201 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	PHKG1	Q16816	387 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	TTLL9	Q3SXZ7	439 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	TMEM196	Q5HYL7	178 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	LDLRAP1	Q5SW96	308 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	LPCAT2	Q7L5N7	544 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	CACUL1	Q86Y37	369 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	RASGEF1A	Q8N9B8	481 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	NUS1	Q96E22	293 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	MAEL	Q96JY0	434 aa	Known RBP	15.07	■□□□□ 0
DDX39A-209	ENST00000589318	CGREF1	Q99674	301 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	GABRG3	Q99928	467 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	KCNK12	Q9HB15	430 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	ZBTB26	Q9HCK0	441 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	HEBP1	Q9NRV9	189 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	NUDT4	Q9NZJ9	180 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	PCTP	Q9UKL6	214 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	CDYL	Q9Y232	598 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318		A0A1B0GTL3	188 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	CFAP99	D6REC4	459 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318		H3BSA7	217 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	BOLA2-SMG1P6	H3BVE0	249 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	EIF3F	O00303	357 aa	Predicted RBP	15.06	■□□□□ 0
DDX39A-209	ENST00000589318	SOX1	O00570	391 aa	Predicted RBP	15.06	■□□□□ 0
DDX39A-209	ENST00000589318	FBP2	O00757	339 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	NEMP1	O14524	444 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	MBTPS2	O43462	519 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	ADAM23	O75077	832 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	MSH3	P20585	1137 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	S100A1	P23297	94 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	EPHA3	P29320	983 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	RGS19	P49795	217 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	CTSC	P53634	463 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	UBAP2L	Q14157	1087 aa	Known RBP	15.06	■□□□□ 0
DDX39A-209	ENST00000589318	PON2	Q15165	354 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	ZNF829	Q3KNS6	432 aa	Predicted RBP	15.06	■□□□□ 0
DDX39A-209	ENST00000589318	VRK3	Q8IV63	474 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	SLC44A3	Q8N4M1	653 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	TRIML2	Q8N7C3	387 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	IL17RC	Q8NAC3	791 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	PDPR	Q8NCN5	879 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	TSPAN14	Q8NG11	270 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	HM13	Q8TCT9	377 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	PPP1R36	Q96LQ0	422 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	TCF7L2	Q9NQB0	619 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	CD274	Q9NZQ7	290 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	FAM32A	Q9Y421	112 aa	Known RBP	15.06	■□□□□ 0
DDX39A-209	ENST00000589318	OARD1	Q9Y530	152 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	PIAS3	Q9Y6X2	628 aa		15.06	■□□□□ 0
DDX39A-209	ENST00000589318	GOLGA8Q	A0A0J9YX86	632 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	GOLGA8O	A6NCC3	632 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	GOLGA8N	F8WBI6	632 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	E2F3	O00716	465 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	INPP4B	O15327	924 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	FFAR2	O15552	330 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	ADH1B	P00325	375 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	NTSR1	P30989	418 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	CLC	Q05315	142 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	MAP7D1	Q3KQU3	841 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	LSM12	Q3MHD2	195 aa	Known RBP	15.05	■□□□□ 0
DDX39A-209	ENST00000589318	UGT3A2	Q3SY77	523 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	ANKS6	Q68DC2	871 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	NLRP8	Q86W28	1048 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	RALGPS2	Q86X27	583 aa	Predicted RBP	15.05	■□□□□ 0
DDX39A-209	ENST00000589318	BEND7	Q8N7W2	519 aa	Predicted RBP	15.05	■□□□□ 0
DDX39A-209	ENST00000589318	ESAM	Q96AP7	390 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	ASB2	Q96Q27	587 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	FAM126A	Q9BYI3	521 aa	Predicted RBP	15.05	■□□□□ 0
DDX39A-209	ENST00000589318	MKRN2	Q9H000	416 aa	Known RBP	15.05	■□□□□ 0
DDX39A-209	ENST00000589318	LIMD1	Q9UGP4	676 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318	COLQ	Q9Y215	455 aa	Predicted RBP	15.05	■□□□□ 0
DDX39A-209	ENST00000589318	TRAF6	Q9Y4K3	522 aa		15.05	■□□□□ 0
DDX39A-209	ENST00000589318		A0A1W2PQF6	199 aa		15.05	■□□□□ -0
DDX39A-209	ENST00000589318	TMEM202	A6NGA9	273 aa		15.05	■□□□□ -0
DDX39A-209	ENST00000589318	SHISA7	A6NL88	538 aa		15.05	■□□□□ -0
DDX39A-209	ENST00000589318	OR2AG2	A6NM03	316 aa		15.05	■□□□□ -0
DDX39A-209	ENST00000589318	SDHD	O14521	159 aa		15.05	■□□□□ -0
DDX39A-209	ENST00000589318	NUAK1	O60285	661 aa		15.05	■□□□□ -0
DDX39A-209	ENST00000589318	LZTS3	O60299	673 aa	Predicted RBP	15.05	■□□□□ -0
DDX39A-209	ENST00000589318	KLHL41	O60662	606 aa		15.05	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms