RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 CBSLP0DN79 551 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 RBP3P10745 1247 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 PVRP15151 417 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 PSMB4P28070 264 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 PTPN7P35236 360 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 CBSP35520 551 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 NSG1P42857 185 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 GABRA4P48169 554 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 OTUD4Q01804 1114 aaKnown RBP13.51□□□□□ -0.25
VMP1-209ENST00000588915 ELOAQ14241 798 aaKnown RBP13.51□□□□□ -0.25
VMP1-209ENST00000588915 NR6A1Q15406 480 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 MRPL14Q6P1L8 145 aaKnown RBP13.51□□□□□ -0.25
VMP1-209ENST00000588915 Q6ZS92 163 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 TMTC1Q8IUR5 882 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 ZADH2Q8N4Q0 377 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 CISD2Q8N5K1 135 aaKnown RBP13.51□□□□□ -0.25
VMP1-209ENST00000588915 DENND1AQ8TEH3 1009 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 COG1Q8WTW3 980 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 C19orf60Q96EN9 201 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 C5orf34Q96MH7 638 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 TBL1YQ9BQ87 522 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 FAM96AQ9H5X1 160 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 FAM60AQ9NP50 221 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 ATP13A2Q9NQ11 1180 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 NLE1Q9NVX2 485 aaPredicted RBP13.51□□□□□ -0.25
VMP1-209ENST00000588915 P4HTMQ9NXG6 502 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 IFT80Q9P2H3 777 aaPredicted RBP13.51□□□□□ -0.25
VMP1-209ENST00000588915 NDOR1Q9UHB4 597 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 ICKQ9UPZ9 632 aa13.51□□□□□ -0.25
VMP1-209ENST00000588915 PTRH2Q9Y3E5 179 aaKnown RBP13.51□□□□□ -0.25
VMP1-209ENST00000588915 COPG1Q9Y678 874 aaKnown RBP13.51□□□□□ -0.25
VMP1-209ENST00000588915 A0A0J9YY10 115 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 ANKUB1A6NFN9 424 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 AKR1B15C9JRZ8 316 aaPredicted RBP13.5□□□□□ -0.25
VMP1-209ENST00000588915 KCNN4O15554 427 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 ONECUT2O95948 504 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 UGT2B7P16662 529 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 CTNNA2P26232 953 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 ACADLP28330 430 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 CETN2P41208 172 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 MARCKSL1P49006 195 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 EIF3EP60228 445 aaKnown RBP13.5□□□□□ -0.25
VMP1-209ENST00000588915 TMPRSS15P98073 1019 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 CACNG1Q06432 222 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 PRKG2Q13237 762 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 OLIG2Q13516 323 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 ITIH4Q14624 930 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 KYNUQ16719 465 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 SLC5A12Q1EHB4 618 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 UNC5AQ6ZN44 842 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 TTC13Q8NBP0 860 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 STYXQ8WUJ0 223 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 CDKN2AIPNLQ96HQ2 116 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 OR2A14Q96R47 310 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 HGH1Q9BTY7 390 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 SPRTNQ9H040 489 aaPredicted RBP13.5□□□□□ -0.25
VMP1-209ENST00000588915 GOLPH3Q9H4A6 298 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 C10orf88Q9H8K7 445 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 LUC7LQ9NQ29 371 aaKnown RBP13.5□□□□□ -0.25
VMP1-209ENST00000588915 AGPAT4Q9NRZ5 378 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 TXLNGQ9NUQ3 528 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 PLCL2Q9UPR0 1127 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 ASF1AQ9Y294 204 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 PCDHA3Q9Y5H8 950 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 POLEQ07864 2286 aa13.5□□□□□ -0.25
VMP1-209ENST00000588915 AGPSO00116 658 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 ZSCAN9O15535 394 aaPredicted RBP13.49□□□□□ -0.25
VMP1-209ENST00000588915 KRT86O43790 486 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 AP2A1O95782 977 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 PTMSP20962 102 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 PSMA3P25788 255 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 CTNNA1P35221 906 aaKnown RBP13.49□□□□□ -0.25
VMP1-209ENST00000588915 DCTP40126 519 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 CDKN1CP49918 316 aaPredicted RBP13.49□□□□□ -0.25
VMP1-209ENST00000588915 AIMP2Q13155 320 aaKnown RBP13.49□□□□□ -0.25
VMP1-209ENST00000588915 RAPSNQ13702 412 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 KIR2DS3Q14952 304 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 PARP6Q2NL67 630 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 NKAIN1Q4KMZ8 207 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 DARS2Q6PI48 645 aaKnown RBP13.49□□□□□ -0.25
VMP1-209ENST00000588915 TAS2R42Q7RTR8 314 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 CCDC170Q8IYT3 715 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 DNAJC22Q8N4W6 341 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 CLDN19Q8N6F1 224 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 OR5K2Q8NHB8 316 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 FLVCR1-AS1Q8TAF5 88 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 KRT35Q92764 455 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 DLG3Q92796 817 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 DNAJC1Q96KC8 554 aaKnown RBP13.49□□□□□ -0.25
VMP1-209ENST00000588915 NRTNQ99748 197 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 NDC1Q9BTX1 674 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 OSBPL8Q9BZF1 889 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 ILKAPQ9H0C8 392 aaPredicted RBP13.49□□□□□ -0.25
VMP1-209ENST00000588915 KLHL25Q9H0H3 589 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 XKR8Q9H6D3 395 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 CENPEQ02224 2701 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 ANKRD12Q6UB98 2062 aa13.49□□□□□ -0.25
VMP1-209ENST00000588915 PCSK5Q92824 1860 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 SLC5A10A0PJK1 596 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 F8W8V4 182 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms