RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PPP1R32Q7Z5V6 425 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 SERPINA9Q86WD7 417 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 PIANPQ8IYJ0 282 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 OR5AR1Q8NGP9 310 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 OR2Y1Q8NGV0 311 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 TFGQ92734 400 aaPredicted RBP17.79■□□□□ 0.44
CCDC43-204ENST00000588687 SPATA13Q96N96 652 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 IP6K3Q96PC2 410 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 SPHK1Q9NYA1 384 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 AAR2Q9Y312 384 aaKnown RBP17.79■□□□□ 0.44
CCDC43-204ENST00000588687 CROCCQ5TZA2 2017 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 FBN2P35556 2912 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 CBFA2T2O43439 604 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 UMODP07911 640 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 AGXTP21549 392 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 ACADLP28330 430 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 PEBP1P30086 187 aaKnown RBP17.78■□□□□ 0.44
CCDC43-204ENST00000588687 SOX8P57073 446 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 TBX2Q13207 712 aaPredicted RBP17.78■□□□□ 0.44
CCDC43-204ENST00000588687 SSPNQ14714 243 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 DBN1Q16643 649 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 C1orf189Q5VU69 101 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 KCTD11Q693B1 232 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 GALNT16Q8N428 558 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 CISD2Q8N5K1 135 aaKnown RBP17.78■□□□□ 0.44
CCDC43-204ENST00000588687 CCDC110Q8TBZ0 833 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 PROKR1Q8TCW9 393 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 FAM118BQ9BPY3 351 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 TBL1YQ9BQ87 522 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 SPRTNQ9H040 489 aaPredicted RBP17.78■□□□□ 0.44
CCDC43-204ENST00000588687 ZBTB20Q9HC78 741 aaPredicted RBP17.78■□□□□ 0.44
CCDC43-204ENST00000588687 SLC22A11Q9NSA0 550 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 P4HTMQ9NXG6 502 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 MAP10Q9P2G4 905 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 CDYLQ9Y232 598 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 PCDHGA10Q9Y5H3 936 aa17.78■□□□□ 0.44
CCDC43-204ENST00000588687 ZSCAN9O15535 394 aaPredicted RBP17.77■□□□□ 0.44
CCDC43-204ENST00000588687 OR2B3O76000 313 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 ITGAXP20702 1163 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 CTNNA1P35221 906 aaKnown RBP17.77■□□□□ 0.44
CCDC43-204ENST00000588687 PTPN7P35236 360 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 SPARCL1Q14515 664 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 KYNUQ16719 465 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 UNC5AQ6ZN44 842 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 Q6ZS92 163 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 CUZD1Q86UP6 607 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 CDKL3Q8IVW4 592 aaPredicted RBP17.77■□□□□ 0.44
CCDC43-204ENST00000588687 GPR135Q8IZ08 494 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 FER1L6-AS2Q96M78 137 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 C17orf62Q9BQA9 187 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 ANP32EQ9BTT0 268 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 SLC7A5P2Q9GIP4 190 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 VPS37BQ9H9H4 285 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 NLE1Q9NVX2 485 aaPredicted RBP17.77■□□□□ 0.44
CCDC43-204ENST00000588687 DHCR7Q9UBM7 475 aaKnown RBP17.77■□□□□ 0.44
CCDC43-204ENST00000588687 EFR3BQ9Y2G0 817 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 PTRH2Q9Y3E5 179 aaKnown RBP17.77■□□□□ 0.44
CCDC43-204ENST00000588687 PRSS21Q9Y6M0 314 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 AP1M2Q9Y6Q5 423 aa17.77■□□□□ 0.44
CCDC43-204ENST00000588687 KCNN4O15554 427 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 CHRM5P08912 532 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-204ENST00000588687 GSTM1P09488 218 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 RBP3P10745 1247 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 PSMA3P25788 255 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 SHMT2P34897 504 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 FOLR3P41439 243 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 COPS2P61201 443 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 GSTM4Q03013 218 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 SLC9A5Q14940 896 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 ZRANB3Q5FWF4 1079 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 MLIPQ5VWP3 458 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 TICAM1Q8IUC6 712 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 CNGA4Q8IV77 575 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 CLEC1AQ8NC01 280 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.76■□□□□ 0.43
CCDC43-204ENST00000588687 FEZ2Q9UHY8 353 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-204ENST00000588687 SLC5A6Q9Y289 635 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 CSAG2Q9Y5P2 127 aa17.76■□□□□ 0.43
CCDC43-204ENST00000588687 A0A0J9YY10 115 aa17.75■□□□□ 0.43
CCDC43-204ENST00000588687 ANKUB1A6NFN9 424 aa17.75■□□□□ 0.43
CCDC43-204ENST00000588687 BHMG1C9JSJ3 638 aaPredicted RBP17.75■□□□□ 0.43
CCDC43-204ENST00000588687 AP2A2O94973 939 aa17.75■□□□□ 0.43
CCDC43-204ENST00000588687 ALPPP05187 535 aa17.75■□□□□ 0.43
CCDC43-204ENST00000588687 TPM1P09493 284 aa17.75■□□□□ 0.43
CCDC43-204ENST00000588687 EIF3EP60228 445 aaKnown RBP17.75■□□□□ 0.43
CCDC43-204ENST00000588687 DCDP81605 110 aaKnown RBP17.75■□□□□ 0.43
CCDC43-204ENST00000588687 NKAIN1Q4KMZ8 207 aa17.75■□□□□ 0.43
CCDC43-204ENST00000588687 DNAJC22Q8N4W6 341 aa17.75■□□□□ 0.43
CCDC43-204ENST00000588687 UBE2Q2Q8WVN8 375 aa17.75■□□□□ 0.43
CCDC43-204ENST00000588687 MENTQ9BUN1 341 aa17.75■□□□□ 0.43
CCDC43-204ENST00000588687 OR6C2Q9NZP2 312 aa17.75■□□□□ 0.43
CCDC43-204ENST00000588687 SRPK3Q9UPE1 567 aa17.75■□□□□ 0.43
CCDC43-204ENST00000588687 MDC1Q14676 2089 aaKnown RBP17.75■□□□□ 0.43
CCDC43-204ENST00000588687 DIDO1Q9BTC0 2240 aaKnown RBP17.74■□□□□ 0.43
CCDC43-204ENST00000588687 SLC5A10A0PJK1 596 aa17.74■□□□□ 0.43
CCDC43-204ENST00000588687 MACROD2A1Z1Q3 448 aa17.74■□□□□ 0.43
CCDC43-204ENST00000588687 E2F3O00716 465 aa17.74■□□□□ 0.43
CCDC43-204ENST00000588687 LIN7AO14910 233 aaPredicted RBP17.74■□□□□ 0.43
CCDC43-204ENST00000588687 MAP3K7O43318 606 aa17.74■□□□□ 0.43
CCDC43-204ENST00000588687 MAGEA1P43355 309 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms