RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 SEMA7AO75326 666 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 METTL18O95568 372 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 FTH1P02794 183 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 CAPN1P07384 714 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 HBQ1P09105 142 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 RNF224P0DH78 156 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 MSNP26038 577 aaKnown RBP13.25□□□□□ -0.29
HDAC5-208ENST00000588419 SHMT2P34897 504 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 CD151P48509 253 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 EIF2S3LQ2VIR3 472 aaKnown RBP13.25□□□□□ -0.29
HDAC5-208ENST00000588419 CCDC38Q502W7 563 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 PAPD7Q5XG87 772 aaKnown RBP13.25□□□□□ -0.29
HDAC5-208ENST00000588419 UNC5AQ6ZN44 842 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 MRGPREQ86SM8 312 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 TAX1BP1Q86VP1 789 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 PIANPQ8IYJ0 282 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 ZNF655Q8N720 491 aaPredicted RBP13.25□□□□□ -0.29
HDAC5-208ENST00000588419 RBMXL3Q8N7X1 1067 aaKnown RBP13.25□□□□□ -0.29
HDAC5-208ENST00000588419 Q8NA96 180 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 ACRBPQ8NEB7 543 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 ALG3Q92685 438 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 CDKN2AIPNLQ96HQ2 116 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 SPRTNQ9H040 489 aaPredicted RBP13.25□□□□□ -0.29
HDAC5-208ENST00000588419 LRRC40Q9H9A6 602 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 MLXIPLQ9NP71 852 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 SPHK1Q9NYA1 384 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 IFT80Q9P2H3 777 aaPredicted RBP13.25□□□□□ -0.29
HDAC5-208ENST00000588419 DHCR7Q9UBM7 475 aaKnown RBP13.25□□□□□ -0.29
HDAC5-208ENST00000588419 CIDEBQ9UHD4 219 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 CDYLQ9Y232 598 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 RP1L1Q8IWN7 2480 aaPredicted RBP13.24□□□□□ -0.29
HDAC5-208ENST00000588419 TRBV5-4A0A0C4DH59 114 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 A0A0J9YY10 115 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 TCP11X1B4DZS4 312 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 MASP2O00187 686 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 PEX12O00623 359 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 HCRTR1O43613 425 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 KRT86O43790 486 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 CEACAM4O75871 244 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 CTSBP07858 339 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 CHRM5P08912 532 aaPredicted RBP13.24□□□□□ -0.29
HDAC5-208ENST00000588419 PTPN7P35236 360 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 GDF10P55107 478 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 RPA4Q13156 261 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 ZIC1Q15915 447 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 PARP6Q2NL67 630 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 ZNF658BQ4V348 819 aaPredicted RBP13.24□□□□□ -0.29
HDAC5-208ENST00000588419 KIAA1328Q86T90 577 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 TMTC1Q8IUR5 882 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 FAM20CQ8IXL6 584 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 DNAAF3Q8N9W5 541 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 CLEC1AQ8NC01 280 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 STYXQ8WUJ0 223 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.24□□□□□ -0.29
HDAC5-208ENST00000588419 PNPLA2Q96AD5 504 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 DPH2Q9BQC3 489 aaPredicted RBP13.24□□□□□ -0.29
HDAC5-208ENST00000588419 ARNT2Q9HBZ2 717 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 EFR3BQ9Y2G0 817 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 PCDHGB7Q9Y5F8 929 aa13.24□□□□□ -0.29
HDAC5-208ENST00000588419 GRID2IPA4D2P6 1211 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 H7C0S8 307 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 LIN7AO14910 233 aaPredicted RBP13.23□□□□□ -0.29
HDAC5-208ENST00000588419 ZSCAN9O15535 394 aaPredicted RBP13.23□□□□□ -0.29
HDAC5-208ENST00000588419 AP2A2O94973 939 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 NSG1P42857 185 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 NR6A1Q15406 480 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 P3H1Q32P28 736 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 VWA5B1Q5TIE3 1220 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 ZNF385CQ66K41 422 aaPredicted RBP13.23□□□□□ -0.29
HDAC5-208ENST00000588419 PEX26Q7Z412 305 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 C2orf73Q8N5S3 287 aaPredicted RBP13.23□□□□□ -0.29
HDAC5-208ENST00000588419 OR52K1Q8NGK4 314 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 CFAP61Q8NHU2 1237 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 C19orf60Q96EN9 201 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 TCTN2Q96GX1 697 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 OR2A14Q96R47 310 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 C17orf62Q9BQA9 187 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 TMEM121Q9BTD3 319 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 DHRS4Q9BTZ2 278 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 ILKAPQ9H0C8 392 aaPredicted RBP13.23□□□□□ -0.29
HDAC5-208ENST00000588419 AMFRQ9UKV5 643 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 KLHL20Q9Y2M5 609 aa13.23□□□□□ -0.29
HDAC5-208ENST00000588419 EPN1Q9Y6I3 576 aaPredicted RBP13.23□□□□□ -0.29
HDAC5-208ENST00000588419 SPTAN1Q13813 2472 aaKnown RBP13.23□□□□□ -0.29
HDAC5-208ENST00000588419 USP9XQ93008 2570 aaPredicted RBP13.23□□□□□ -0.29
HDAC5-208ENST00000588419 CCDC162PA2VCL2 907 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 QSOX1O00391 747 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 ALOX12BO75342 701 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 AP2A1O95782 977 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 FTCDO95954 541 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 GSTM1P09488 218 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 OR56A5P0C7T3 313 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 MSL3P1P0C860 447 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 DCDP81605 110 aaKnown RBP13.22□□□□□ -0.29
HDAC5-208ENST00000588419 GSTM4Q03013 218 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 ITIH4Q14624 930 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 CYP2A13Q16696 494 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 LYPLAL1Q5VWZ2 237 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 KCTD11Q693B1 232 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 PPP1R21Q6ZMI0 780 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms