RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 CCDC88CQ9P219 2028 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 TRBV5-4A0A0C4DH59 114 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 SHMT2P34897 504 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 RWDD2BP57060 319 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 CACNG1Q06432 222 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 ZNF658BQ4V348 819 aaPredicted RBP16.24■□□□□ 0.19
LINC01842-201ENST00000588275 SYTL3Q4VX76 610 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 VWA5B1Q5TIE3 1220 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 ZNF385CQ66K41 422 aaPredicted RBP16.24■□□□□ 0.19
LINC01842-201ENST00000588275 NAPRTQ6XQN6 538 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 UNC5AQ6ZN44 842 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 PIANPQ8IYJ0 282 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 CLEC1AQ8NC01 280 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 C19orf60Q96EN9 201 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 SMAD5Q99717 465 aaKnown RBP16.24■□□□□ 0.19
LINC01842-201ENST00000588275 C17orf62Q9BQA9 187 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 TXLNGQ9NUQ3 528 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 NLE1Q9NVX2 485 aaPredicted RBP16.24■□□□□ 0.19
LINC01842-201ENST00000588275 CUEDC1Q9NWM3 386 aaPredicted RBP16.24■□□□□ 0.19
LINC01842-201ENST00000588275 IFT80Q9P2H3 777 aaPredicted RBP16.24■□□□□ 0.19
LINC01842-201ENST00000588275 DHCR7Q9UBM7 475 aaKnown RBP16.24■□□□□ 0.19
LINC01842-201ENST00000588275 PLAGL1Q9UM63 463 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 PRSS21Q9Y6M0 314 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 NOTCH2Q04721 2471 aa16.24■□□□□ 0.19
LINC01842-201ENST00000588275 PEX12O00623 359 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 HCRTR1O43613 425 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 TJP3O95049 919 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 FOXL2P58012 376 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 NR6A1Q15406 480 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 ZIC1Q15915 447 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 CCDC170Q8IYT3 715 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 IQCKQ8N0W5 287 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 ZNF655Q8N720 491 aaPredicted RBP16.23■□□□□ 0.19
LINC01842-201ENST00000588275 TCTN2Q96GX1 697 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 CDKN2AIPNLQ96HQ2 116 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 FER1L6-AS2Q96M78 137 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 TRIM5Q9C035 493 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 LRRC40Q9H9A6 602 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 ARNT2Q9HBZ2 717 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 SPHK1Q9NYA1 384 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 CDYLQ9Y232 598 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 EFR3BQ9Y2G0 817 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 AP1M2Q9Y6Q5 423 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 UNC79Q9P2D8 2635 aa16.23■□□□□ 0.19
LINC01842-201ENST00000588275 A0A0J9YY10 115 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 OR51F1A6NGY5 319 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 ISM1B1AKI9 464 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 H7C0S8 307 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 MASP2O00187 686 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 LIN7AO14910 233 aaPredicted RBP16.22■□□□□ 0.19
LINC01842-201ENST00000588275 ZSCAN9O15535 394 aaPredicted RBP16.22■□□□□ 0.19
LINC01842-201ENST00000588275 KLF7O75840 302 aaPredicted RBP16.22■□□□□ 0.19
LINC01842-201ENST00000588275 AP2A2O94973 939 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 FTH1P02794 183 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 ALPPP05187 535 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 CTSBP07858 339 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 CHRM5P08912 532 aaPredicted RBP16.22■□□□□ 0.19
LINC01842-201ENST00000588275 GSTM1P09488 218 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 MSNP26038 577 aaKnown RBP16.22■□□□□ 0.19
LINC01842-201ENST00000588275 VARSP26640 1264 aaKnown RBP16.22■□□□□ 0.19
LINC01842-201ENST00000588275 PTPN7P35236 360 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 NSG1P42857 185 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 CSE1LP55060 971 aaKnown RBP16.22■□□□□ 0.19
LINC01842-201ENST00000588275 DCDP81605 110 aaKnown RBP16.22■□□□□ 0.19
LINC01842-201ENST00000588275 GSTM4Q03013 218 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 SSPNQ14714 243 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 PLEKHN1Q494U1 663 aaPredicted RBP16.22■□□□□ 0.19
LINC01842-201ENST00000588275 LYPLAL1Q5VWZ2 237 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 RHBDD2Q6NTF9 364 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 TMTC1Q8IUR5 882 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 GALNT16Q8N428 558 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 CISD2Q8N5K1 135 aaKnown RBP16.22■□□□□ 0.19
LINC01842-201ENST00000588275 FAM71DQ8N9W8 422 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 STYXQ8WUJ0 223 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 SNRNP40Q96DI7 357 aaKnown RBP16.22■□□□□ 0.19
LINC01842-201ENST00000588275 IP6K3Q96PC2 410 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 OR2A14Q96R47 310 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 C19orf43Q9BQ61 176 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 ILKAPQ9H0C8 392 aaPredicted RBP16.22■□□□□ 0.19
LINC01842-201ENST00000588275 IMPACTQ9P2X3 320 aa16.22■□□□□ 0.19
LINC01842-201ENST00000588275 HIVEP3Q5T1R4 2406 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 SNRNP200O75643 2136 aaKnown RBP16.21■□□□□ 0.19
LINC01842-201ENST00000588275 RCCD1A6NED2 376 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 GOLGA6L9A6NEM1 432 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 IPO7O95373 1038 aaKnown RBP16.21■□□□□ 0.19
LINC01842-201ENST00000588275 METTL18O95568 372 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 CYP2A13Q16696 494 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 PARP6Q2NL67 630 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 SKOR2Q2VWA4 1001 aaPredicted RBP16.21■□□□□ 0.19
LINC01842-201ENST00000588275 DCAF10Q5QP82 559 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 FAM20CQ8IXL6 584 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 TBC1D21Q8IYX1 336 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 PROKR1Q8TCW9 393 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 ALG3Q92685 438 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 GBP5Q96PP8 586 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 ASF1BQ9NVP2 202 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 P4HTMQ9NXG6 502 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 C5AR2Q9P296 337 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 POLG2Q9UHN1 485 aa16.21■□□□□ 0.19
LINC01842-201ENST00000588275 B3GNT3Q9Y2A9 372 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms