RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 C20orf194Q5TEA3 1177 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 SPAG16Q8N0X2 631 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 TRIML1Q8N9V2 468 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 MCUQ8NE86 351 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 C16orf70Q9BSU1 422 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 NUP85Q9BW27 656 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 OSGEPL1Q9H4B0 414 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 A4GALTQ9NPC4 353 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 PPANQ9NQ55 473 aaKnown RBP3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 ERAP1Q9NZ08 941 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 SEC63Q9UGP8 760 aaKnown RBP3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 MOB4Q9Y3A3 225 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 COL5A2P05997 1499 aaPredicted RBP3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 ANKRD61A6NGH8 418 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 XRCC3O43542 346 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 MED24O75448 989 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 MOCS3O95396 460 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 MATR3P43243 847 aaKnown RBP eCLIP3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 CCR10P46092 362 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 SUOXP51687 545 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 KRTAP10-3P60369 221 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 DMPKQ09013 629 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 SPINK14Q6IE38 97 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 MAATS1Q7Z4T9 603 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 LDB1Q86U70 411 aaPredicted RBP3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 LACC1Q8IV20 430 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 AFAP1Q8N556 730 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 MAPKAPK5-AS1Q8N8E1 139 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 OR2AJ1Q8NGZ0 328 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 DGCR6LQ9BY27 220 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 MIS12Q9H081 205 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 DPAGT1Q9H3H5 408 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 CACNG4Q9UBN1 327 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 ZNF69Q9UC07 566 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 EPHA6Q9UF33 1036 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 LRWD1Q9UFC0 647 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 ASIC3Q9UHC3 531 aa3.8□□□□□ -1.8
CACNA1A-208ENST00000587451 VILLO15195 856 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 ZBED4O75132 1171 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 BAIAP3O94812 1187 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 GPIP06744 558 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 HADHAP40939 763 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 SLC9A3P48764 834 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 PNLIPRP2P54317 469 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 NAP1L1P55209 391 aaKnown RBP3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 E2F5Q15329 346 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 PDLIM3Q53GG5 364 aaPredicted RBP3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 RAB41Q5JT25 222 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 ELFN2Q5R3F8 820 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 PLEKHS1Q5SXH7 462 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 HOGA1Q86XE5 327 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 RPAP2Q8IXW5 612 aaPredicted RBP3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 CDK20Q8IZL9 346 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 TEX19Q8NA77 164 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 OR13J1Q8NGT2 312 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 PHLDA1Q8WV24 401 aaPredicted RBP3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 IRGQQ8WZA9 623 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 NSMCE3Q96MG7 304 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 ZNF300Q96RE9 604 aaPredicted RBP3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 NAP1L4Q99733 375 aaKnown RBP3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 PKP2Q99959 881 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 PIGQQ9BRB3 760 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 URM1Q9BTM9 101 aaKnown RBP3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 KIFC3Q9BVG8 833 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 PANK2Q9BZ23 570 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 UPF3AQ9H1J1 476 aaKnown RBP3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 S1PR5Q9H228 398 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 OSER1Q9NX31 292 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 PLAGL1Q9UM63 463 aa3.79□□□□□ -1.8
CACNA1A-208ENST00000587451 ITIH6Q6UXX5 1313 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 LOC100509620A0A075B734 347 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 PTP4A3O75365 173 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 GATA1P15976 413 aaPredicted RBP3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 UGT1A4P22310 534 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 MAPK4P31152 587 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 HOXC13P31276 330 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 ACSL1P33121 698 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 ZNF239Q16600 458 aaKnown RBP3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 C2CD6Q53TS8 623 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 KRT79Q5XKE5 535 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 FAM180BQ6P0A1 224 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 FIGLAQ6QHK4 219 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 TMPRSS11FQ6ZWK6 438 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 SH2D6Q7Z4S9 175 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 KIRREL3Q8IZU9 778 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 OR10G8Q8NGN5 311 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 OR5M8Q8NGP6 311 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 FNBP1Q96RU3 617 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 PPIL3Q9H2H8 161 aaKnown RBP3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 MMP27Q9H306 513 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 CPVLQ9H3G5 476 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 TAB2Q9NYJ8 693 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 OR6C2Q9NZP2 312 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 SUCLA2Q9P2R7 463 aaPredicted RBP3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 ZHX1Q9UKY1 873 aaPredicted RBP3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 MTUS1Q9ULD2 1270 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 ZHX2Q9Y6X8 837 aa3.78□□□□□ -1.8
CACNA1A-208ENST00000587451 ZNF541Q9H0D2 1346 aa3.77□□□□□ -1.81
CACNA1A-208ENST00000587451 SERINC4A6NH21 518 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms