RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 GSDMCQ9BYG8 508 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 NUAK2Q9H093 628 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 ALG2Q9H553 416 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 RASSF1Q9NS23 344 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 COPS7AQ9UBW8 275 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 RGS17Q9UGC6 210 aaPredicted RBP9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 MBLAC1A4D2B0 266 aaPredicted RBP9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 A8MT66 165 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 MAGEB17A8MXT2 336 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 K7ERQ8 282 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 AGPSO00116 658 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 ETV3P41162 512 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 IDH3AP50213 366 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 PNLIPRP1P54315 467 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 RAB8AP61006 207 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 OC90Q02509 493 aaPredicted RBP9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 PDZK1Q5T2W1 519 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 PIK3R6Q5UE93 754 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 SUSD1Q6UWL2 747 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 MCEMP1Q8IX19 187 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 COX18Q8N8Q8 333 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 TLCD1Q96CP7 247 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 GSTK1Q9Y2Q3 226 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 BACE2Q9Y5Z0 518 aa9.54□□□□□ -0.88
GPATCH8-205ENST00000587228 OAZ2O95190 189 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 IFNW1P05000 195 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 NCK1P16333 377 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 EPCAMP16422 314 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 WDR4P57081 412 aaKnown RBP9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 HERVK_113P63132 956 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 MYBPC1Q00872 1141 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 HKDC1Q2TB90 917 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 PTCHD3Q3KNS1 767 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 RAB6CQ53S08 254 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 TRIQKQ629K1 86 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 ERICH5Q6P6B1 374 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 PTCHD4Q6ZW05 846 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 ZC3H3Q8IXZ2 948 aaKnown RBP9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 TBC1D21Q8IYX1 336 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 Q8N9G6 341 aaPredicted RBP9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 SMPDL3AQ92484 453 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 SH3GL2Q99962 352 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 YIPF4Q9BSR8 244 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 DUSP26Q9BV47 211 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 ERVK-6Q9BXR3 956 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 RAB6CQ9H0N0 254 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 PLAGL1Q9UM63 463 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 PNMA8CA0A1B0GUJ8 204 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 EFCAB10A6NFE3 127 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 G3V2T6 193 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 MED26O95402 600 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 ZBTB11O95625 1053 aaPredicted RBP9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 IL7RP16871 459 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 IMPDH1P20839 514 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 FOXN2P32314 431 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 AFF1P51825 1210 aaKnown RBP9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 AP1S2P56377 157 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 MTPNP58546 118 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 BNC1Q01954 994 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 ERN2Q76MJ5 926 aaKnown RBP9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 MOSPD2Q8NHP6 518 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 SLC13A3Q8WWT9 602 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 SMPDL3BQ92485 455 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 C1orf74Q96LT6 269 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 PAIP1Q9H074 479 aaKnown RBP9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 R3HDMLQ9H3Y0 253 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 NSUN3Q9H649 340 aaKnown RBP9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 PDP1Q9P0J1 537 aaPredicted RBP9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 PDPK1O15530 556 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 NDUFS4O43181 175 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 STC1P52823 247 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 PCDH1Q08174 1060 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 TMEM115Q12893 351 aaPredicted RBP9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 C1orf61Q13536 156 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 COL9A2Q14055 689 aaPredicted RBP9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 PCBP2Q15366 365 aaKnown RBP eCLIP9.53□□□□□ -0.882e-8■■■■□ 21.3
GPATCH8-205ENST00000587228 DHCR24Q15392 516 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 RFX4Q33E94 735 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 TMEM164Q5U3C3 297 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 REP15Q6BDI9 236 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 SLC8B1Q6J4K2 584 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 ABRAXAS1Q6UWZ7 409 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 RPS27LQ71UM5 84 aaKnown RBP9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 ZBTB46Q86UZ6 589 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 PACS2Q86VP3 889 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 KBTBD2Q8IY47 623 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 PQLC1Q8N2U9 271 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 SFRP1Q8N474 314 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 ZBED6CLQ96FA7 236 aaPredicted RBP9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 PSKH2Q96QS6 385 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 SLC32A1Q9H598 525 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 SSU72Q9NP77 194 aaKnown RBP9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 VPS29Q9UBQ0 182 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 KLF15Q9UIH9 416 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 CA14Q9ULX7 337 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 TEX264Q9Y6I9 313 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 FAM159BA6NKW6 160 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 TMEM233B4DJY2 109 aa9.53□□□□□ -0.88
GPATCH8-205ENST00000587228 CTSAP10619 480 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms