RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 TECRLQ5HYJ1 363 aa16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 TTC23LQ6PF05 361 aa16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 TRIM48Q8IWZ4 208 aa16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 EID2Q8N6I1 236 aa16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 STAG3L4Q8TBR4 150 aa16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 ARL8AQ96BM9 186 aa16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 ATP6V1G3Q96LB4 118 aa16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 FERD3LQ96RJ6 166 aa16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 UNKQ9C0B0 810 aaKnown RBP16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 UCK1Q9HA47 277 aa16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 RDH14Q9HBH5 336 aa16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 ZNF358Q9NW07 568 aa16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 PDE10AQ9Y233 779 aa16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 BTBD3Q9Y2F9 522 aa16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 OARD1Q9Y530 152 aa16.52■□□□□ 0.23
PRKCSH-203ENST00000586486 ZNF292O60281 2723 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 LY6G6EA0A0G2JKS1 128 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 C4orf47A7E2U8 309 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 MYO1CO00159 1063 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 NUDT21O43809 227 aaKnown RBP16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 TYROBPO43914 113 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 RBP1P09455 135 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 MAP4P27816 1152 aaKnown RBP16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 BDKRB1P46663 353 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 GLRBP48167 497 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 RPIAP49247 311 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 LIMK1P53667 647 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 AP1S2P56377 157 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 OR4D1Q15615 310 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 PHKG1Q16816 387 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 PROX2Q3B8N5 592 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 CDHR3Q6ZTQ4 885 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 PHC3Q8NDX5 983 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 OR6C4Q8NGE1 309 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 MCOLN3Q8TDD5 553 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 RAD51AP1Q96B01 352 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 APOLD1Q96LR9 279 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 ATOH8Q96SQ7 321 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 MRPL57Q9BQC6 102 aaKnown RBP16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 HGH1Q9BTY7 390 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 ALG9Q9H6U8 611 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 GRID1Q9ULK0 1009 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 U3KQA8 63 aa16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 ZFHX2Q9C0A1 2572 aaPredicted RBP16.51■□□□□ 0.23
PRKCSH-203ENST00000586486 ASCC3Q8N3C0 2202 aaKnown RBP16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 TRBV23OR9-2A0A075B6M9 112 aa16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 HMGB1P1B2RPK0 211 aaPredicted RBP16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 KDM1AO60341 852 aa16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 SYF2O95926 243 aaKnown RBP16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 CREB1P16220 341 aa16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 CDKL1Q00532 357 aa16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 GRB7Q14451 532 aa16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 KRT33BQ14525 404 aa16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 TTMPQ5BVD1 217 aa16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 ZNF438Q7Z4V0 828 aa16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 SH3KBP1Q96B97 665 aa16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 CAMK1GQ96NX5 476 aa16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 TRIM54Q9BYV2 358 aa16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 MRPL46Q9H2W6 279 aaKnown RBP16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 TMEM216Q9P0N5 145 aa16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 XPR1Q9UBH6 696 aa16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 RNF112Q9ULX5 631 aa16.5■□□□□ 0.23
PRKCSH-203ENST00000586486 LILRA5A6NI73 299 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 SYCE1LA8MT33 242 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 GDF9O60383 454 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 CKMT1AP12532 417 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 GLB1P16278 677 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 MAGOHP61326 146 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 GPR18Q14330 331 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 NR1D2Q14995 579 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 NR0B2Q15466 257 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 TGFBIQ15582 683 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 CCDC153Q494R4 210 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 CDKL4Q5MAI5 379 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 N4BP2L1Q5TBK1 243 aaPredicted RBP16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 STPG1Q5TH74 334 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 TMEM26Q6ZUK4 368 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 FRA10AC1Q70Z53 315 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 NAXDQ8IW45 347 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 TMEM151AQ8N4L1 468 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 BAHD1Q8TBE0 780 aaPredicted RBP16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 MENTQ9BUN1 341 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 IQCGQ9H095 443 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 EVA1BQ9NVM1 165 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 SPATA7Q9P0W8 599 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 EMCNQ9ULC0 261 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 PADI4Q9UM07 663 aa16.49■□□□□ 0.23
PRKCSH-203ENST00000586486 PRAMEF33A0A0G2JMD5 474 aa16.48■□□□□ 0.23
PRKCSH-203ENST00000586486 PABPN1LA6NDY0 278 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-203ENST00000586486 PPM1DO15297 605 aa16.48■□□□□ 0.23
PRKCSH-203ENST00000586486 PRPF4O43172 522 aaKnown RBP eCLIP16.48■□□□□ 0.232e-9■□□□□ 10
PRKCSH-203ENST00000586486 HIST1H2AGP0C0S8 130 aaPredicted RBP16.48■□□□□ 0.23
PRKCSH-203ENST00000586486 ERGP11308 486 aa16.48■□□□□ 0.23
PRKCSH-203ENST00000586486 HIST1H2ADP20671 130 aa16.48■□□□□ 0.23
PRKCSH-203ENST00000586486 KCNC1P48547 511 aa16.48■□□□□ 0.23
PRKCSH-203ENST00000586486 PRKG2Q13237 762 aa16.48■□□□□ 0.23
PRKCSH-203ENST00000586486 CCSMST1Q4G0I0 132 aa16.48■□□□□ 0.23
PRKCSH-203ENST00000586486 GPSM1Q86YR5 675 aa16.48■□□□□ 0.23
PRKCSH-203ENST00000586486 OR52E1Q8NGJ3 308 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms