RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 PPFIBP2Q8ND30 876 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 USP7Q93009 1102 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 SPDL1Q96EA4 605 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 ASIC5Q9NY37 505 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 ADA2Q9NZK5 511 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 SUCOQ9UBS9 1254 aaKnown RBP13.85□□□□□ -0.19
LIG3-205ENST00000585941 KLQ9UEF7 1012 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 EIF3LQ9Y262 564 aaKnown RBP13.85□□□□□ -0.19
LIG3-205ENST00000585941 RNF11Q9Y3C5 154 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 TICRRQ7Z2Z1 1910 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 SERTM1A2A2V5 107 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 KLHL33A6NCF5 533 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 PLK4O00444 970 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 TEAD1P28347 426 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 DRD3P35462 400 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 GALK1P51570 392 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 PRKG2Q13237 762 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 CEACAM7Q14002 265 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 IMPG1Q17R60 797 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 AP5B1Q2VPB7 878 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 ZNF658BQ4V348 819 aaPredicted RBP13.84□□□□□ -0.19
LIG3-205ENST00000585941 ZNF776Q68DI1 518 aaPredicted RBP13.84□□□□□ -0.19
LIG3-205ENST00000585941 SDE2Q6IQ49 451 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 ZFP1Q6P2D0 407 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 TRAPPC5Q8IUR0 188 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 FAM9CQ8IZT9 166 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 MINDY1Q8N5J2 469 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 SLC26A7Q8TE54 656 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 ABHD8Q96I13 439 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 OR2AG1Q9H205 316 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 CLDND1Q9NY35 253 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 ZNF490Q9ULM2 529 aaPredicted RBP13.84□□□□□ -0.19
LIG3-205ENST00000585941 CCL27Q9Y4X3 112 aa13.84□□□□□ -0.19
LIG3-205ENST00000585941 TRPM6Q9BX84 2022 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 TMEM202A6NGA9 273 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 ARHGEF33A8MVX0 844 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 ANHXE9PGG2 379 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 K7ESM1 405 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 LILRB5O75023 590 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 EPORP19235 508 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 KIR2DL1P43626 348 aaPredicted RBP13.83□□□□□ -0.2
LIG3-205ENST00000585941 GNPDA1P46926 289 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 POLR2JP52435 117 aaKnown RBP13.83□□□□□ -0.2
LIG3-205ENST00000585941 PCDH1Q08174 1060 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 TRAP1Q12931 704 aaKnown RBP13.83□□□□□ -0.2
LIG3-205ENST00000585941 ABRQ12979 859 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 HTR4Q13639 388 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 FLOT2Q14254 428 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 STARD3Q14849 445 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 MAP7D1Q3KQU3 841 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 AGBL4Q5VU57 503 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 LIPJQ5W064 366 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 FAM219BQ5XKK7 198 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 LRRC74BQ6ZQY2 392 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 PRR23BQ6ZRT6 265 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 KBTBD6Q86V97 674 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 HM13Q8TCT9 377 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 ASB9Q96DX5 294 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 COX14Q96I36 57 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 DPEP2Q9H4A9 486 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 TMEM181Q9P2C4 612 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 ATXN10Q9UBB4 475 aa13.83□□□□□ -0.2
LIG3-205ENST00000585941 LEF1Q9UJU2 399 aaPredicted RBP13.83□□□□□ -0.2
LIG3-205ENST00000585941 CCDC154A6NI56 674 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 GPR89AB7ZAQ6 455 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 E7ENX8 843 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 NPIPB8E9PQR5 432 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 FFAR3O14843 346 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 MID1O15344 667 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 GPR42O15529 346 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 EEDO75530 441 aaKnown RBP13.82□□□□□ -0.2
LIG3-205ENST00000585941 BCAS2O75934 225 aaPredicted RBP13.82□□□□□ -0.2
LIG3-205ENST00000585941 GPR89BP0CG08 455 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 SLC2A4P14672 509 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 CAPN3P20807 821 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 NTSR1P30989 418 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 DPP6P42658 865 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 PREPP48147 710 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 NME5P56597 212 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 DLX2Q07687 328 aaPredicted RBP13.82□□□□□ -0.2
LIG3-205ENST00000585941 RPA4Q13156 261 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 TRIM25Q14258 630 aaKnown RBP13.82□□□□□ -0.2
LIG3-205ENST00000585941 VPS26BQ4G0F5 336 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 CACHD1Q5VU97 1274 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 PNCKQ6P2M8 343 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 AADATQ8N5Z0 425 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 OR2T3Q8NH03 318 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 OR2L2Q8NH16 312 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 MSLNLQ96KJ4 702 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 ZBTB18Q99592 522 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 GPATCH1Q9BRR8 931 aaKnown RBP13.82□□□□□ -0.2
LIG3-205ENST00000585941 RPP25Q9BUL9 199 aaKnown RBP13.82□□□□□ -0.2
LIG3-205ENST00000585941 C1orf50Q9BV19 199 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 ELOVL6Q9H5J4 265 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 ZNF576Q9H609 170 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 SLC52A3Q9NQ40 469 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 SLC22A14Q9Y267 594 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 LRRC42Q9Y546 428 aa13.82□□□□□ -0.2
LIG3-205ENST00000585941 DNMT3AQ9Y6K1 912 aaPredicted RBP13.82□□□□□ -0.2
LIG3-205ENST00000585941 RANBP2P49792 3224 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms