RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 URI1O94763 535 aaPredicted RBP15.76■□□□□ 0.11
ERBB2-222ENST00000584908 HAUS5O94927 633 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 MATN4O95460 622 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 ERVK-10P10266 1014 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 LIPCP11150 499 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 POLR2CP19387 275 aaPredicted RBP15.76■□□□□ 0.11
ERBB2-222ENST00000584908 CHRM3P20309 590 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 ITPKBP27987 946 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 ABCG1P45844 678 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 PRKAA1Q13131 559 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 CLN3Q13286 438 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 TUBB2AQ13885 445 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 GRB7Q14451 532 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 IL11RAQ14626 422 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 KYNUQ16719 465 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 ANKS6Q68DC2 871 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 DCUN1D3Q8IWE4 304 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 ZBTB2Q8N680 514 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 NRTNQ99748 197 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 TUBB2BQ9BVA1 445 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 RAB17Q9H0T7 212 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 C1GALT1Q9NS00 363 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 IARS2Q9NSE4 1012 aaKnown RBP15.76■□□□□ 0.11
ERBB2-222ENST00000584908 GALPQ9UBC7 116 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 BTRCQ9Y297 605 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 UTP11Q9Y3A2 253 aaKnown RBP15.76■□□□□ 0.11
ERBB2-222ENST00000584908 MRFAP1Q9Y605 127 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 E5RI56 91 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 EIF3HO15372 352 aaKnown RBP eCLIP15.75■□□□□ 0.111e-6■□□□□ 8.3
ERBB2-222ENST00000584908 ZBTB11O95625 1053 aaPredicted RBP15.75■□□□□ 0.11
ERBB2-222ENST00000584908 CD9P21926 228 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 GABRB3P28472 473 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 PRDX3P30048 256 aaKnown RBP15.75■□□□□ 0.11
ERBB2-222ENST00000584908 SEPHS1P49903 392 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 HSD11B2P80365 405 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 MPP1Q00013 466 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 CAV1Q03135 178 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 ABRQ12979 859 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 PDIA2Q13087 525 aaKnown RBP15.75■□□□□ 0.11
ERBB2-222ENST00000584908 TEDDM1Q5T9Z0 273 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 CYB5D1Q6P9G0 228 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 CNSTQ6PJW8 725 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 NEK10Q6ZWH5 1172 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 D2HGDHQ8N465 521 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 FBXO36Q8NEA4 188 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 GSDMBQ8TAX9 411 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 SEC14L1Q92503 715 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 TRIM44Q96DX7 344 aaPredicted RBP15.75■□□□□ 0.11
ERBB2-222ENST00000584908 AARSD1Q9BTE6 412 aaKnown RBP15.75■□□□□ 0.11
ERBB2-222ENST00000584908 CCDC68Q9H2F9 335 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 DPH5Q9H2P9 285 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 XKR8Q9H6D3 395 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 APMAPQ9HDC9 416 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 MOCS1Q9NZB8 636 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 DHRS7Q9Y394 339 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 PCDHB11Q9Y5F2 797 aa15.75■□□□□ 0.11
ERBB2-222ENST00000584908 C2orf74A8MZ97 194 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 STMND1H3BQB6 276 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 POLR1CO15160 346 aaPredicted RBP15.74■□□□□ 0.11
ERBB2-222ENST00000584908 KLK10O43240 276 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 C1orf105O95561 183 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 AHSGP02765 367 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 F7P08709 466 aaPredicted RBP15.74■□□□□ 0.11
ERBB2-222ENST00000584908 MSL3P1P0C860 447 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 FGF5P12034 268 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 PKLRP30613 574 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 CCNFP41002 786 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 RAB28P51157 221 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 UCNP55089 124 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 SH3BP2P78314 561 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 FASTKD3Q14CZ7 662 aaKnown RBP15.74■□□□□ 0.11
ERBB2-222ENST00000584908 HP1BP3Q5SSJ5 553 aaPredicted RBP15.74■□□□□ 0.11
ERBB2-222ENST00000584908 TRMT10BQ6PF06 316 aaKnown RBP15.74■□□□□ 0.11
ERBB2-222ENST00000584908 ZFAND4Q86XD8 727 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 GIMAP7Q8NHV1 300 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 FLVCR1-AS1Q8TAF5 88 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 HNRNPLLQ8WVV9 542 aaKnown RBP15.74■□□□□ 0.11
ERBB2-222ENST00000584908 CFAP36Q96G28 342 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 NAF1Q96HR8 494 aaKnown RBP15.74■□□□□ 0.11
ERBB2-222ENST00000584908 SLC30A3Q99726 388 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 TDRKHQ9Y2W6 561 aaKnown RBP15.74■□□□□ 0.11
ERBB2-222ENST00000584908 TMEM184BQ9Y519 407 aaPredicted RBP15.74■□□□□ 0.11
ERBB2-222ENST00000584908 NFS1Q9Y697 457 aa15.74■□□□□ 0.11
ERBB2-222ENST00000584908 LOC400499M0QZD8 3231 aa15.73■□□□□ 0.11
ERBB2-222ENST00000584908 PIPSLA2A3N6 862 aa15.73■□□□□ 0.11
ERBB2-222ENST00000584908 GSAPA4D1B5 854 aa15.73■□□□□ 0.11
ERBB2-222ENST00000584908 EIF3FO00303 357 aaPredicted RBP15.73■□□□□ 0.11
ERBB2-222ENST00000584908 KRT37O76014 449 aa15.73■□□□□ 0.11
ERBB2-222ENST00000584908 CHRM5P08912 532 aaPredicted RBP15.73■□□□□ 0.11
ERBB2-222ENST00000584908 CARSP49589 748 aaKnown RBP15.73■□□□□ 0.11
ERBB2-222ENST00000584908 TIAL1Q01085 375 aaKnown RBP eCLIP15.73■□□□□ 0.11
ERBB2-222ENST00000584908 KIR2DS3Q14952 304 aa15.73■□□□□ 0.11
ERBB2-222ENST00000584908 TTLL9Q3SXZ7 439 aa15.73■□□□□ 0.11
ERBB2-222ENST00000584908 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.73■□□□□ 0.11
ERBB2-222ENST00000584908 ACSBG2Q5FVE4 666 aa15.73■□□□□ 0.11
ERBB2-222ENST00000584908 SPESP1Q6UW49 350 aa15.73■□□□□ 0.11
ERBB2-222ENST00000584908 BPHLQ86WA6 291 aaPredicted RBP15.73■□□□□ 0.11
ERBB2-222ENST00000584908 ANKMY2Q8IV38 441 aa15.73■□□□□ 0.11
ERBB2-222ENST00000584908 RASGRP3Q8IV61 690 aa15.73■□□□□ 0.11
ERBB2-222ENST00000584908 ZBED8Q8IZ13 594 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms