RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 RHOP08100 348 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 CELA2AP08217 269 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PDGFRAP16234 1089 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 CYP11B2P19099 503 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 HTR7P34969 479 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PRCPP42785 496 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 AGTR2P50052 363 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ARSEP51690 589 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ARSFP54793 590 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 WDR5P61964 334 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 RAE1P78406 368 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 GALK2Q01415 458 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 GAD2Q05329 585 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ARHGAP1Q07960 439 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 GRIK3Q13003 919 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC18A3Q16572 532 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ARMC4Q5T2S8 1044 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 GARNL3Q5VVW2 1013 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 RAB12Q6IQ22 244 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF449Q6P9G9 518 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 KIAA1324Q6UXG2 1013 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PPP1R21Q6ZMI0 780 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 MSANTD1Q6ZTZ1 278 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 RABEPKQ7Z6M1 372 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TBC1D26Q86UD7 250 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 CCDC190Q86UF4 302 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 EXOC3L1Q86VI1 746 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PEX5LQ8IYB4 626 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 RNF168Q8IYW5 571 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 SCML4Q8N228 414 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 C12orf76Q8N812 135 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 OR8K5Q8NH50 307 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 RAB40AQ8WXH6 277 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TFAP2BQ92481 460 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TRIB2Q92519 343 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ELP4Q96EB1 424 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ELMOD3Q96FG2 381 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PGAP3Q96FM1 320 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 SPATA33Q96N06 139 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 DDX50Q9BQ39 737 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PANK2Q9BZ23 570 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PLEKHA4Q9H4M7 779 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 IL21RQ9HBE5 538 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 EPB41L5Q9HCM4 733 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 RGS18Q9NS28 235 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 MTUS1Q9ULD2 1270 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PCDHA12Q9UN75 941 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 SRPRBQ9Y5M8 271 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 HS3ST3B1Q9Y662 390 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 MUC3AQ02505 3323 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF462Q96JM2 2506 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 CYP2D7A0A087X1C5 515 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 A0A096LPK6 155 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 TCRBV7S3A2A0A539 114 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 WDR91A4D1P6 747 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 GOLGA6L4A6NEF3 574 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 DNAJC9-AS1A6NH13 148 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 SRRM3A6NNA2 597 aaPredicted RBP1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 CLIC1O00299 241 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF185O15231 689 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 KERAO60938 352 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 TMCC1O94876 653 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 PRSS23O95084 383 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 ADRB2P07550 413 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 VIMP08670 466 aaKnown RBP1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 CYP2D6P10635 497 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 TGM2P21980 687 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 DUSP1P28562 367 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM3BP58499 235 aaPredicted RBP1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 PMPCAQ10713 525 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 DMP1Q13316 513 aaPredicted RBP1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 KPNB1Q14974 876 aaKnown RBP1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 COL28A1Q2UY09 1125 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 MIDNQ504T8 468 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 RARS2Q5T160 578 aaKnown RBP1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 KIAA0895LQ68EN5 471 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 INO80CQ6PI98 192 aaPredicted RBP1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC24A5Q71RS6 500 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 ADCK1Q86TW2 530 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 ITIH5Q86UX2 942 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 EPHX4Q8IUS5 362 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 CCDC83Q8IWF9 413 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 DSELQ8IZU8 1212 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 LRRC52Q8N7C0 313 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 SCAIQ8N9R8 606 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 CAMKVQ8NCB2 501 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 POC1BQ8TC44 478 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 NPIPB3Q92617 1050 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 SGCDQ92629 289 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 ARHGEF26Q96DR7 871 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 PPP1R2P1Q96PQ5 205 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 TEFMQ96QE5 360 aaKnown RBP1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 ACCSQ96QU6 501 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 SEPHS2Q99611 448 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 MGME1Q9BQP7 344 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 POLR1BQ9H9Y6 1135 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 SAP30LQ9HAJ7 183 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 CYP3A43Q9HB55 503 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 RAVER2Q9HCJ3 691 aaKnown RBP1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 TRPV5Q9NQA5 729 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms