RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 CTBP1Q13363 440 aa20.13■□□□□ 0.81
TOP3A-218ENST00000584669 RNF187Q5TA31 235 aaPredicted RBP20.13■□□□□ 0.81
TOP3A-218ENST00000584669 DENND6AQ8IWF6 608 aa20.13■□□□□ 0.81
TOP3A-218ENST00000584669 TBC1D21Q8IYX1 336 aa20.13■□□□□ 0.81
TOP3A-218ENST00000584669 UNC5BQ8IZJ1 945 aa20.13■□□□□ 0.81
TOP3A-218ENST00000584669 UBXN4Q92575 508 aa20.13■□□□□ 0.81
TOP3A-218ENST00000584669 KIAA1143Q96AT1 154 aaPredicted RBP20.13■□□□□ 0.81
TOP3A-218ENST00000584669 FAM136AQ96C01 138 aa20.13■□□□□ 0.81
TOP3A-218ENST00000584669 SLC41A2Q96JW4 573 aa20.13■□□□□ 0.81
TOP3A-218ENST00000584669 PANX3Q96QZ0 392 aa20.13■□□□□ 0.81
TOP3A-218ENST00000584669 CD180Q99467 661 aa20.13■□□□□ 0.81
TOP3A-218ENST00000584669 SLC12A9Q9BXP2 914 aa20.13■□□□□ 0.81
TOP3A-218ENST00000584669 TRIM31Q9BZY9 425 aa20.13■□□□□ 0.81
TOP3A-218ENST00000584669 TRIT1Q9H3H1 467 aaKnown RBP20.13■□□□□ 0.81
TOP3A-218ENST00000584669 GPN2Q9H9Y4 310 aaPredicted RBP20.13■□□□□ 0.81
TOP3A-218ENST00000584669 POMT2Q9UKY4 750 aa20.13■□□□□ 0.81
TOP3A-218ENST00000584669 PLAGL1Q9UM63 463 aa20.13■□□□□ 0.81
TOP3A-218ENST00000584669 TDRKHQ9Y2W6 561 aaKnown RBP20.13■□□□□ 0.81
TOP3A-218ENST00000584669 ANKRD12Q6UB98 2062 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 GSAPA4D1B5 854 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 SLCO2B1O94956 709 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 S1PR4O95977 384 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 ABRQ12979 859 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 PRKAA1Q13131 559 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 THOC5Q13769 683 aaKnown RBP20.12■□□□□ 0.81
TOP3A-218ENST00000584669 TMED2Q15363 201 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 LONRF1Q17RB8 773 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 BBS9Q3SYG4 887 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 AMIGO1Q86WK6 493 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 IGDCC3Q8IVU1 814 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 ADGRF3Q8IZF5 1079 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 NLGN4XQ8N0W4 816 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 NLGN4YQ8NFZ3 816 aaPredicted RBP20.12■□□□□ 0.81
TOP3A-218ENST00000584669 OR5K2Q8NHB8 316 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 CFAP61Q8NHU2 1237 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 ELMO2Q96JJ3 720 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 TRIM4Q9C037 500 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 FBXO6Q9NRD1 293 aaPredicted RBP20.12■□□□□ 0.81
TOP3A-218ENST00000584669 C20orf96Q9NUD7 363 aaPredicted RBP20.12■□□□□ 0.81
TOP3A-218ENST00000584669 FAM169AQ9Y6X4 670 aa20.12■□□□□ 0.81
TOP3A-218ENST00000584669 ZNF891A8MT65 544 aaPredicted RBP20.11■□□□□ 0.81
TOP3A-218ENST00000584669 PFDN6O15212 129 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 EBLN1P0CF75 366 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 SFTPCP11686 197 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 FOLR1P15328 257 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 PGAM1P18669 254 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 SLC1A2P43004 574 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 ITGA8P53708 1063 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 C2orf54Q08AI8 447 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 MORF4L2Q15014 288 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 DNAJC21Q5F1R6 531 aaKnown RBP20.11■□□□□ 0.81
TOP3A-218ENST00000584669 HP1BP3Q5SSJ5 553 aaPredicted RBP20.11■□□□□ 0.81
TOP3A-218ENST00000584669 HIBCHQ6NVY1 386 aaPredicted RBP20.11■□□□□ 0.81
TOP3A-218ENST00000584669 SIDT2Q8NBJ9 832 aaKnown RBP20.11■□□□□ 0.81
TOP3A-218ENST00000584669 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.11■□□□□ 0.81
TOP3A-218ENST00000584669 ZPBPQ9BS86 351 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 SPRY4Q9C004 299 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 STARD5Q9NSY2 213 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 INTS10Q9NVR2 710 aaKnown RBP20.11■□□□□ 0.81
TOP3A-218ENST00000584669 GALPQ9UBC7 116 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 POLG2Q9UHN1 485 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 PILRAQ9UKJ1 303 aa20.11■□□□□ 0.81
TOP3A-218ENST00000584669 TP73O15350 636 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 STK17BO94768 372 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 ESR1P03372 595 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 PRKAR1AP10644 381 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 PKMP14618 531 aaKnown RBP20.1■□□□□ 0.81
TOP3A-218ENST00000584669 ZNF28P17035 718 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 CDH3P22223 829 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 PRDX3P30048 256 aaKnown RBP20.1■□□□□ 0.81
TOP3A-218ENST00000584669 ADARP55265 1226 aaKnown RBP20.1■□□□□ 0.81
TOP3A-218ENST00000584669 CRYMQ14894 314 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 BORAQ6PGQ7 559 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 UNC5AQ6ZN44 842 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 OTOAQ7RTW8 1153 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 KMT5CQ86Y97 462 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 SPNS2Q8IVW8 549 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 SPATA4Q8NEY3 305 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 SNF8Q96H20 258 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 EBNA1BP2Q99848 306 aaKnown RBP20.1■□□□□ 0.81
TOP3A-218ENST00000584669 ACTR10Q9NZ32 417 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 CIDEBQ9UHD4 219 aa20.1■□□□□ 0.81
TOP3A-218ENST00000584669 TSR3Q9UJK0 312 aaKnown RBP20.1■□□□□ 0.81
TOP3A-218ENST00000584669 RUVBL2Q9Y230 463 aaKnown RBP20.1■□□□□ 0.81
TOP3A-218ENST00000584669 SETXQ7Z333 2677 aaKnown RBP20.1■□□□□ 0.81
TOP3A-218ENST00000584669 SLC9B1P1A6NJY1 282 aa20.09■□□□□ 0.81
TOP3A-218ENST00000584669 EFCAB8A8MWE9 144 aa20.09■□□□□ 0.81
TOP3A-218ENST00000584669 KPNA5O15131 536 aa20.09■□□□□ 0.81
TOP3A-218ENST00000584669 SEC31AO94979 1220 aaKnown RBP20.09■□□□□ 0.81
TOP3A-218ENST00000584669 MAP4P27816 1152 aaKnown RBP20.09■□□□□ 0.81
TOP3A-218ENST00000584669 SHMT2P34897 504 aa20.09■□□□□ 0.81
TOP3A-218ENST00000584669 RPL21P46778 160 aaKnown RBP20.09■□□□□ 0.81
TOP3A-218ENST00000584669 ARL4DP49703 201 aa20.09■□□□□ 0.81
TOP3A-218ENST00000584669 HSD11B2P80365 405 aa20.09■□□□□ 0.81
TOP3A-218ENST00000584669 MPP1Q00013 466 aa20.09■□□□□ 0.81
TOP3A-218ENST00000584669 IL11RAQ14626 422 aa20.09■□□□□ 0.81
TOP3A-218ENST00000584669 HSP90AA5PQ58FG0 334 aa20.09■□□□□ 0.81
TOP3A-218ENST00000584669 TIPARPQ7Z3E1 657 aaKnown RBP20.09■□□□□ 0.81
TOP3A-218ENST00000584669 KCNMB4Q86W47 210 aa20.09■□□□□ 0.81
TOP3A-218ENST00000584669 LMNTD1Q8N9Z9 388 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms