RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 ITM2AO43736 263 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 PRH1P02810 166 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 GJB1P08034 283 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 IFI30P13284 250 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 CLCN2P51788 898 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 TAF10Q12962 218 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 COL9A3Q14050 684 aaPredicted RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 TARBP2Q15633 366 aaKnown RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 KLHL35Q6PF15 583 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 TMEM110Q86TL2 294 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 SERPINA9Q86WD7 417 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 CENPSQ8N2Z9 138 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 TOMM5Q8N4H5 51 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 OXR1Q8N573 874 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 FCRL5Q96RD9 977 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 MAU2Q9Y6X3 613 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 FAM189A1O60320 539 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 CPNE3O75131 537 aaKnown RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 ENTPD6O75354 484 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 APOL3O95236 402 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 MT-CYBP00156 380 aaPredicted RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 DSC3Q14574 896 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 GRIK5Q16478 980 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 ANKRD23Q86SG2 305 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 LINC00471Q8N535 108 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 INO80EQ8NBZ0 244 aaPredicted RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 FAM129BQ96TA1 746 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 HTATIP2Q9BUP3 242 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 OXCT2Q9BYC2 517 aaPredicted RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 IMP3Q9NV31 184 aaKnown RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 FBXW11Q9UKB1 542 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 DIP2CQ9Y2E4 1556 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 LOC100130705A0A1B0GUX0 176 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 PPP1R11O60927 126 aaPredicted RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 GSTM3P21266 225 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 ECHS1P30084 290 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 BRCC3P46736 316 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 EPGNQ6UW88 154 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 PYROXD2Q8N2H3 581 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 NATD1Q8N6N6 113 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 ING5Q8WYH8 240 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 EMID1Q96A84 441 aaPredicted RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 ZBED6CLQ96FA7 236 aaPredicted RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 OR52B2Q96RD2 323 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 MND1Q9BWT6 205 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 LGR4Q9BXB1 951 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 EBPLQ9BY08 206 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 PHPT1Q9NRX4 125 aaPredicted RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 RBMXL2O75526 392 aaKnown RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 MYCLP1P12525 358 aaPredicted RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 GLDCP23378 1020 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 XKP51811 444 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 ADAM15Q13444 863 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 SLC30A6Q6NXT4 461 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 PTF1AQ7RTS3 328 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 PHYKPLQ8IUZ5 450 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 LGI4Q8N135 537 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 SIDT2Q8NBJ9 832 aaKnown RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 OR6K2Q8NGY2 324 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 PPTC7Q8NI37 304 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 RDH12Q96NR8 316 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 COL21A1Q96P44 957 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 HBEGFQ99075 208 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 MAPKAP1Q9BPZ7 522 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 CORO1BQ9BR76 489 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 FAM83DQ9H4H8 585 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 NMUR1Q9HB89 426 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 ALG5Q9Y673 324 aa12.82□□□□□ -0.36
RNF43-208ENST00000584437 TRIM64CA6NLI5 447 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 CDC40O60508 579 aaKnown RBP eCLIP12.81□□□□□ -0.36
RNF43-208ENST00000584437 TXNL4AP83876 142 aaKnown RBP12.81□□□□□ -0.36
RNF43-208ENST00000584437 CD83Q01151 205 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 ZNF155Q12901 538 aaPredicted RBP12.81□□□□□ -0.36
RNF43-208ENST00000584437 SF1Q15637 639 aaKnown RBP12.81□□□□□ -0.36
RNF43-208ENST00000584437 CADM2Q8N3J6 435 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 PCBD2Q9H0N5 130 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 AKTIPQ9H8T0 292 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 FAM53CQ9NYF3 392 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 MARK1Q9P0L2 795 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 ILVBLA1L0T0 632 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 DNAJB5O75953 348 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 GNAZP19086 355 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 ERP29P30040 261 aaKnown RBP12.81□□□□□ -0.36
RNF43-208ENST00000584437 GSK3BP49841 420 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 GBX2P52951 348 aaPredicted RBP12.81□□□□□ -0.36
RNF43-208ENST00000584437 CRISP3P54108 245 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 FBXO48Q5FWF7 155 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 C6orf183Q5T699 404 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 UBAP2Q5T6F2 1119 aaKnown RBP12.81□□□□□ -0.36
RNF43-208ENST00000584437 ADGRG6Q86SQ4 1221 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 FRMD6Q96NE9 622 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 TLR4O00206 839 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 DCLK1O15075 740 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 PDPK1O15530 556 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 ITGA10O75578 1167 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 IRF9Q00978 393 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 SFT2D3Q587I9 215 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 DRAXINQ8NBI3 349 aaPredicted RBP12.81□□□□□ -0.36
RNF43-208ENST00000584437 KAT2AQ92830 837 aa12.81□□□□□ -0.36
RNF43-208ENST00000584437 SLC30A2Q9BRI3 323 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms