RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 TUBB2BQ9BVA1 445 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 KLHL25Q9H0H3 589 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 FANCEQ9HB96 536 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 KCND1Q9NSA2 647 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 ASIC3Q9UHC3 531 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 IL17BQ9UHF5 180 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 PADI1Q9ULC6 663 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 MAD1L1Q9Y6D9 718 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 SPTBP11277 2137 aa19.79■□□□□ 0.76
SS18-224ENST00000584083 FAM237BA0A1B0GVD1 139 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 SLCO2B1O94956 709 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 NTRK1P04629 796 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 CHRM5P08912 532 aaPredicted RBP19.78■□□□□ 0.76
SS18-224ENST00000584083 PVRP15151 417 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 ST6GAL1P15907 406 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 DLSTP36957 453 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 C19orf57Q0VDD7 668 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 THOC5Q13769 683 aaKnown RBP19.78■□□□□ 0.76
SS18-224ENST00000584083 TBR1Q16650 682 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 TYSND1Q2T9J0 566 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 TMEM126BQ8IUX1 230 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 NAT8LQ8N9F0 302 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 OR8K5Q8NH50 307 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 SKA2Q8WVK7 121 aaPredicted RBP19.78■□□□□ 0.76
SS18-224ENST00000584083 LPGAT1Q92604 370 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 PITPNM3Q9BZ71 974 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 IL1RAPL1Q9NZN1 696 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 OR6C2Q9NZP2 312 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 CROTQ9UKG9 612 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 CRYL1Q9Y2S2 319 aa19.78■□□□□ 0.76
SS18-224ENST00000584083 ATRXP46100 2492 aa19.77■□□□□ 0.76
SS18-224ENST00000584083 NKX2-8O15522 239 aa19.77■□□□□ 0.76
SS18-224ENST00000584083 SNRNP200O75643 2136 aaKnown RBP19.77■□□□□ 0.76
SS18-224ENST00000584083 TPBGLP0DKB5 382 aa19.77■□□□□ 0.76
SS18-224ENST00000584083 PRKAR1AP10644 381 aa19.77■□□□□ 0.76
SS18-224ENST00000584083 OGNP20774 298 aaKnown RBP19.77■□□□□ 0.76
SS18-224ENST00000584083 LINC00303Q3SY05 128 aa19.77■□□□□ 0.76
SS18-224ENST00000584083 SPESP1Q6UW49 350 aa19.77■□□□□ 0.76
SS18-224ENST00000584083 UNC5DQ6UXZ4 953 aa19.77■□□□□ 0.76
SS18-224ENST00000584083 ZNF501Q96CX3 271 aaPredicted RBP19.77■□□□□ 0.76
SS18-224ENST00000584083 TRAPPC9Q96Q05 1148 aa19.77■□□□□ 0.76
SS18-224ENST00000584083 NAPGQ99747 312 aaPredicted RBP19.77■□□□□ 0.76
SS18-224ENST00000584083 PIEZO2Q9H5I5 2752 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 CTAGE9A4FU28 777 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 ISM1B1AKI9 464 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 H3BMM5 538 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 KATNA1O75449 491 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 SCRG1O75711 98 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 ESR1P03372 595 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 UGT2B7P16662 529 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 MC1RQ01726 317 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 COL9A2Q14055 689 aaPredicted RBP19.76■□□□□ 0.75
SS18-224ENST00000584083 CTSL3PQ5NE16 218 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 RNASEH2BQ5TBB1 312 aaKnown RBP19.76■□□□□ 0.75
SS18-224ENST00000584083 PAPD7Q5XG87 772 aaKnown RBP19.76■□□□□ 0.75
SS18-224ENST00000584083 ZNF470Q6ECI4 717 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 TTC23LQ6PF05 361 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 TMEM135Q86UB9 458 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 TRIM73Q86UV7 250 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 CILP2Q8IUL8 1156 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 DCUN1D3Q8IWE4 304 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 KLHL7Q8IXQ5 586 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 STARD8Q92502 1023 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 FAM136AQ96C01 138 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 MED8Q96G25 268 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 BIRC8Q96P09 236 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 OR2A14Q96R47 310 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 SYTL2Q9HCH5 934 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 SPHK1Q9NYA1 384 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 CIDEBQ9UHD4 219 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 PCYOX1Q9UHG3 505 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 VPS9D1Q9Y2B5 631 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 SAR1BQ9Y6B6 198 aa19.76■□□□□ 0.75
SS18-224ENST00000584083 TMEM150CB9EJG8 249 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 CPNE3O75131 537 aaKnown RBP19.75■□□□□ 0.75
SS18-224ENST00000584083 NIPSNAP2O75323 286 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 C1QL1O75973 258 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 TCN2P20062 427 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 CHRM3P20309 590 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 F8A1P23610 371 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 MAGEA3P43357 314 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 RAB28P51157 221 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 PTK6Q13882 451 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 KYNUQ16719 465 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 PLEKHS1Q5SXH7 462 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 C16orf46Q6P387 395 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 CENPUQ71F23 418 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 PCGF5Q86SE9 256 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 SIGLEC10Q96LC7 697 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 SEMA4CQ9C0C4 833 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 LHX9Q9NQ69 397 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 LATS2Q9NRM7 1088 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 C20orf96Q9NUD7 363 aaPredicted RBP19.75■□□□□ 0.75
SS18-224ENST00000584083 TSR3Q9UJK0 312 aaKnown RBP19.75■□□□□ 0.75
SS18-224ENST00000584083 SERTAD3Q9UJW9 196 aa19.75■□□□□ 0.75
SS18-224ENST00000584083 MRPS18BQ9Y676 258 aaKnown RBP19.75■□□□□ 0.75
SS18-224ENST00000584083 E5RI56 91 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 DNALI1O14645 258 aaPredicted RBP19.74■□□□□ 0.75
SS18-224ENST00000584083 USP1O94782 785 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 FAM87AP0C7U9 286 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms