RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, human

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-217	ENST00000583705	CSTF1	Q05048	431 aa	Known RBP	11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	TCAIM	Q8N3R3	496 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	SPATA22	Q8NHS9	363 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	LRRC20	Q8TCA0	184 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	SH3RF2	Q8TEC5	729 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	SMG9	Q9H0W8	520 aa	Known RBP	11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	TVP23B	Q9NYZ1	205 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	MYO9B	Q13459	2157 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	ADCY10	Q96PN6	1610 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	C13orf42	A0A1B0GVH6	325 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	OR2AT4	A6NND4	320 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	SLC38A8	A6NNN8	435 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	EDNRA	P25101	427 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	ATP6V0D1	P61421	351 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	ID2	Q02363	134 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	SNTA1	Q13424	505 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	UGCG	Q16739	394 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	RFTN2	Q52LD8	501 aa	Predicted RBP	11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	LCN1P1	Q5VSP4	162 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	GLIS3	Q8NEA6	775 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	SPPL2B	Q8TCT7	592 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	FUT8	Q9BYC5	575 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	CYP8B1	Q9UNU6	501 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	PCDHA2	Q9Y5H9	948 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	NEMP2	A6NFY4	417 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705		M0R036	132 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	SLC30A4	O14863	429 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	BCKDK	O14874	412 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	LIAS	O43766	372 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	PSMG1	O95456	288 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	PARP15	Q460N3	678 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	IL23R	Q5VWK5	629 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	B3GNT6	Q6ZMB0	384 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	KCNJ9	Q92806	393 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	P2RY11	Q96G91	374 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	GIN1	Q9NXP7	522 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	KCNK4	Q9NYG8	393 aa		11.11	□□□□□ -0.63
MSI2-217	ENST00000583705	CYP3A5	P20815	502 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	CORO7	P57737	925 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	ILF2	Q12905	390 aa	Known RBP	11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	VARS2	Q5ST30	1063 aa	Known RBP	11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	TTC27	Q6P3X3	843 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	TWIST2	Q8WVJ9	160 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	NXNL1	Q96CM4	212 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	BCAS3	Q9H6U6	928 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	MKKS	Q9NPJ1	570 aa	Predicted RBP	11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	C1orf167	Q5SNV9	1468 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	LRRC7	Q96NW7	1537 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	PLD2	O14939	933 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	SNAP91	O60641	907 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	C8orf89	P0DMQ9	161 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	ADH5	P11766	374 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	RPL6	Q02878	288 aa	Known RBP	11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	EARS2	Q5JPH6	523 aa	Known RBP	11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	WASHC2D	Q5SRD0	308 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	PDSS1	Q5T2R2	415 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	LAS2	Q8IYD9	372 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	FN3K	Q9H479	309 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	NADK	O95544	446 aa	Predicted RBP	11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	IFNW1	P05000	195 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	CD2	P06729	351 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	FH	P07954	510 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	ALAD	P13716	330 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	PPIB	P23284	216 aa	Known RBP	11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	FASLG	P48023	281 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	MMP14	P50281	582 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	HEPACAM	Q14CZ8	416 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	SPDYC	Q5MJ68	293 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	GLYAT	Q6IB77	296 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	YIPF7	Q8N8F6	280 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	PKP4	Q99569	1192 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	ZNF184	Q99676	751 aa	Predicted RBP	11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	GDF3	Q9NR23	364 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	GSKIP	Q9P0R6	139 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	C2CD2	Q9Y426	696 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	STK16	O75716	305 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	KAT7	O95251	611 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	PKM	P14618	531 aa	Known RBP	11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	UGT1A1	P22309	533 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	PDK3	Q15120	406 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	RIT1	Q92963	219 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	CHCHD6	Q9BRQ6	235 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	PCDHB1	Q9Y5F3	818 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	GOT2	P00505	430 aa	Known RBP	11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	HOXB2	P14652	356 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	MPI	P34949	423 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	SLC25A52	Q3SY17	297 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	GATS	Q8NAP1	163 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	AP1S3	Q96PC3	154 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	BCO2	Q9BYV7	579 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	DPEP3	Q9H4B8	488 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	CDC14A	Q9UNH5	594 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	TMEM98	Q9Y2Y6	226 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	C2orf92	A0A1B0GVN3	265 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	MPPED1	O15442	326 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	LGR5	O75473	907 aa		11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	PIM1	P11309	404 aa	Predicted RBP	11.1	□□□□□ -0.63
MSI2-217	ENST00000583705	JUP	P14923	745 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms